iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
Codon Optimised Sequence Pullcodon_optimisation Version 1 (Activity)Used to indicate that a sequence was codon optimised after pulling from the source and before submission
ATGATG Version 1 (Component) SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
GC Optimised Sequence PullGC_Optimised Version 1 (Activity)Used to indicate that a sequence was GC optimised after pulling from the source and before submission
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
Scar25 ATGBBa_K1319106 Version 1 (Component)RFC 25 Translation Start Scar Sequence
tetA(C)fBBa_J31007 Version 1 (Component)tetracycline resistance protein TetA(C) (forward), [cf. BBa_J31006]
BBa_K249006BBa_K249006 Version 1 (Component)Fusion EYFP with C-terminal Arginine Tag
BBa_K382027BBa_K382027 Version 1 (Component)Arabidopsis optimized Miraculin with StrepII C-terminus tag
BBa_K382025BBa_K382025 Version 1 (Component)Arabidopsis optimized Miraculin with StrepII N-terminus tag
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
His-StopBBa_K133133 Version 1 (Component)His affinity tag-stop
BBa_K331002BBa_K331002 Version 1 (Component)ECFP with C-terminal Arginine Tag
BBa_K249008BBa_K249008 Version 1 (Component)YFP with N-terminal Arganine Tag
BBa_J04031BBa_J04031 Version 1 (Component)GFP w/LVA tag
BBa_K382028BBa_K382028 Version 1 (Component)Arabidopsis optimized Brazzein with StrepII C-terminus
BBa_K1321340BBa_K1321340 Version 1 (Component)Double CBD (dCBD) with N-terminal linker
BBa_K1333005BBa_K1333005 Version 1 (Component)M13 bacteriophage g8p with a FLAG tag on C-terminal
tetA(C)bBBa_J31006 Version 1 (Component)tetracycline resistance protein TetA(C) (backwards) [cf. BBa_J31007]
HisTagBBa_J18909 Version 1 (Component)His tag (6xHis; E. coli - optimized)
BBa_I13458BBa_I13458 Version 1 (Component)promoter C and arabinose C operon
BBa_K382026BBa_K382026 Version 1 (Component)Arabidopsis optimized Brazzein with StrepII N-terminus
RFC105 ZBBa_K1362421 Version 1 (Component)C-terminal stop overhang TAAT=STOP+1/3Stop RFC[105] overhang Z
HABBa_I712008 Version 1 (Component)HA affinity tag
NLSBBa_J176008 Version 1 (Component)NLS
BBa_K382021BBa_K382021 Version 1 (Component)Arabidopsis optimized Miraculin
BBa_K105012BBa_K105012 Version 1 (Component)10 aa flexible protein domain linker
PESTBBa_J176018 Version 1 (Component)PEST
BBa_K382040BBa_K382040 Version 1 (Component)Arabidopsis optimized Miraculin+2xYFP
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
BBa_K1333002BBa_K1333002 Version 1 (Component)M13 bacteriophage g3p with start codon of "ATG" and a FLAG tag on C-terminal
linkerBBa_K133132 Version 1 (Component)8 aa protein domain linker
BBa_M36080BBa_M36080 Version 1 (Component)Wild-type miraculin protein with His-tag at C-terminus
BBa_J04051BBa_J04051 Version 1 (Component)RFP with tag
BBa_K331001BBa_K331001 Version 1 (Component)ECFP with N-terminal Arginine Tag
NLSmycSTOPBBa_J176031 Version 1 (Component)NLS myc stop
RGD-His-StBBa_K133036 Version 1 (Component)RGD-His affinity tag-Stop
BBa_K1159316BBa_K1159316 Version 1 (Component)SERK-Receptor TMD with C-terminal GFP and N-terminal <i>Strep</i>-tag II TEV-site linker in RFC[25]
CBDcipABBa_K1615111 Version 1 (Component)CBDcipA with N and C-terminal linker in RFC25
BBa_K1321014BBa_K1321014 Version 1 (Component)CBDCipA with N and C-terminal linker
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
BBa_K1100006BBa_K1100006 Version 1 (Component)optimized sfGFP with Csy4 insulator loci