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Public
Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Public
Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Public
BBa_B0034
BBa_B0034 Version 1 (Component)
RBS (Elowitz 1999) -- defines RBS efficiency
Public
SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Public
BBa_B0030
BBa_B0030 Version 1 (Component)
RBS.1 (strong) -- modified from R. Weiss
Public
SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Public
BBa_B0032
BBa_B0032 Version 1 (Component)
RBS.3 (medium) -- derivative of BBa_0030
Public
Unknown Alteration Sequence Pull
Unknown Version 1 (Activity)
Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
Public
BBa_B0014
BBa_B0014 Version 1 (Component)
double terminator (B0012-B0011)
Public
BBa_B0031
BBa_B0031 Version 1 (Component)
RBS.2 (weak) -- derivative of BBa_0030
Public
BBa_B0034_sequence
BBa_B0034_sequence Version 1 (Sequence)

Public
BBa_B0033
BBa_B0033 Version 1 (Component)
RBS.4 (weaker) -- derivative of BBa_0030
Public
CFY
BBa_K1381017 Version 1 (Component)
CFY-X6 his
Public
BBa_K1381022
BBa_K1381022 Version 1 (Component)
B0034-USP45-CFY-X6 his
Public
BBa_E0430
BBa_E0430 Version 1 (Component)
EYFP (RBS+ LVA- TERM) (B0034.E0030.B0015)
Public
SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Public
lacI
BBa_Q04121 Version 1 (Component)
QPI (B0034.C0012.B0015.R0011)
Public
tetR
BBa_Q04400 Version 1 (Component)
QPI (B0034.C0040.B0015.R0040)
Public
hixC
BBa_J44000 Version 1 (Component)
hixC binding site for Salmonella typhimurium Hin recombinase
Public
BBa_B0035
BBa_B0035 Version 1 (Component)
RBS (B0030 derivative)
Public
His-Stop
BBa_K133133 Version 1 (Component)
His affinity tag-stop
Public
BBa_Q04510
BBa_Q04510 Version 1 (Component)
QPI (B0034.C0051.B0015.R0051)
Public
EYFP
BBa_E0034 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP
Public
BBa_K1381019
BBa_K1381019 Version 1 (Component)
B0034-pelB-CFY-X6 his
Public
BBa_K2066527
BBa_K2066527 Version 1 (Component)
B0034 with scar TACTAG
Public
BBa_B0024
BBa_B0024 Version 1 (Component)
double terminator (B0012-B0011), reversed
Public
RGD-His-St
BBa_K133036 Version 1 (Component)
RGD-His affinity tag-Stop
Public
BBa_K1381023
BBa_K1381023 Version 1 (Component)
J23106-B0034-CFY-X6 his
Public
BBa_K1381020
BBa_K1381020 Version 1 (Component)
J23106-B0034-pelB-CFY-X6 his
Public
BBa_K1381021
BBa_K1381021 Version 1 (Component)
J23116-B0034-pelB-CFY-X6 his
Public
BBa_S0100
BBa_S0100 Version 1 (Component)
B0034.C0012
Public
BBa_E0422
BBa_E0422 Version 1 (Component)
ECFP (RBS+ LVA+ TERM) (B0034.E0022.B0015)
Public
BBa_B0030_sequence
BBa_B0030_sequence Version 1 (Sequence)

Public
tetA(C)f
BBa_J31007 Version 1 (Component)
tetracycline resistance protein TetA(C) (forward), [cf. BBa_J31006]
Public
BBa_E0420
BBa_E0420 Version 1 (Component)
ECFP (RBS+ LVA- TERM) (B0034.E0020.B0015)
Public
BBa_E0434
BBa_E0434 Version 1 (Component)
B0034.E0034.B0015
Public
BBa_K844000
BBa_K844000 Version 1 (Component)
10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
Public
BBa_B0032_sequence
BBa_B0032_sequence Version 1 (Sequence)

Public
BBa_S03518
BBa_S03518 Version 1 (Component)
B0034:C0040
Public
Hin
BBa_J31000 Version 1 (Component)
DNA-invertase Hin from Salmonella typhimurium
Public
His
BBa_K157011 Version 1 (Component)
His affinity tag; Freiburg standard
Public
USP45
BBa_K1381018 Version 1 (Component)
B0034-USP45-(GS)x5
Public
BBa_S03154
BBa_S03154 Version 1 (Component)
B0034.C0078
Public
RE
BBa_J3101 Version 1 (Component)
Recombinational Enhancer (RE) for Hin/Hix inverting
Public
BBa_S03156
BBa_S03156 Version 1 (Component)
B0034.C0079
Public
BBa_K208010
BBa_K208010 Version 1 (Component)
Lac Promoter (BBa_R0010) and RBS (B0034)
Public
BBa_E0432
BBa_E0432 Version 1 (Component)
EYFP (RBS+ LVA+ TERM) (B0034.E0032.B0015)
Public
BBa_B0054
BBa_B0054 Version 1 (Component)
Transcriptional terminator
Public
BBa_B0053
BBa_B0053 Version 1 (Component)
Terminator (His)
Public
BBa_K1585211
BBa_K1585211 Version 1 (Component)
B0034.HPS
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