Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Codon Optimised Sequence Pull
codon_optimisation Version 1 (Activity)
Used to indicate that a sequence was codon optimised after pulling from the source and before submission

GAL1
BBa_J63006 Version 1 (Component)
yeast GAL1 promoter

BBa_K809603
BBa_K809603 Version 1 (Component)
Bovine Pancreatic DNase I (in yeast mt codon table)

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_K809715
BBa_K809715 Version 1 (Component)
T7 promoter + yeast mt RBS(AI1)+ Bovine Pancreatic DNase I (mt)

BBa_K1051003
BBa_K1051003 Version 1 (Component)
Stop codon free GFP in RFC[23] standard

BBa_K165002
BBa_K165002 Version 1 (Component)
Kozak sequence (yeast RBS)

BBa_K1051000
BBa_K1051000 Version 1 (Component)
Stop codon free RFP in RFC[23] standard

BBa_K809702
BBa_K809702 Version 1 (Component)
SP of ZIM17 + Bovine Pancreatic DNase I

BBa_K801012
BBa_K801012 Version 1 (Component)
ADH1 yeast terminator

BBa_K809604
BBa_K809604 Version 1 (Component)
Bovine Pancreatic DNase I

BBa_K165010
BBa_K165010 Version 1 (Component)
ADH1 yeast transcription terminator

BBa_K844000
BBa_K844000 Version 1 (Component)
10x-Histidine (10x-His) Tag with double stop codon (TAATAA)

BBa_K242201
BBa_K242201 Version 1 (Component)
Colicin E9 DNase domain

BBa_K1051004
BBa_K1051004 Version 1 (Component)
Stop codon free mOrange in RFC[23] standard

pTEF
BBa_K165037 Version 1 (Component)
TEF2 yeast constitutive promoter

BBa_K392003
BBa_K392003 Version 1 (Component)
yeast ADH1 terminator

mCherry
BBa_E2060 Version 1 (Component)
derivative of mRFP1, yeast-optimized

BBa_K733001
BBa_K733001 Version 1 (Component)
<i>Ptms</i> - a constitutive promoter in <i>E. coli</i> and <i>B. subtilis</i>.

BBa_K801080
BBa_K801080 Version 1 (Component)
Prepro-Thaumatin, yeast codon optimized

BBa_M39400
BBa_M39400 Version 1 (Component)
DNAse I

BBa_K1051002
BBa_K1051002 Version 1 (Component)
Stop codon free EYFP in RFC[23] standard

BBa_K530008
BBa_K530008 Version 1 (Component)
TDH3 Yeast Promoter

mRFP1
BBa_E2050 Version 1 (Component)
derivative of mRFP1, yeast-optimized

P0310
BBa_J63005 Version 1 (Component)
yeast ADH1 promoter

BBa_I13457
BBa_I13457 Version 1 (Component)
Improved insertion site with two RNAse E cut sites

BBa_K1051001
BBa_K1051001 Version 1 (Component)
Stop codon free ECFP in RFC[23] standard

yfp
BBa_K165005 Version 1 (Component)
Venus YFP, yeast optimized for fusion

SV40 NLS
BBa_J63008 Version 1 (Component)
SV40 nuclear localization sequence from SV40; yeast codon optimized

BBa_K809601
BBa_K809601 Version 1 (Component)
GAL promoter (kozak) without start codon ATG

BBa_E2030
BBa_E2030 Version 1 (Component)
enhanced version of EYFP, yeast-optimized

MaTif
BBa_K2127007 Version 1 (Component)
MT - TERMINATOR

BBa_K1159303
BBa_K1159303 Version 1 (Component)
Signal Peptide of SERK Receptor from <i>Physcomitrella patens</i> in RFC[25]

BBa_K733010
BBa_K733010 Version 1 (Component)
<i>Ptms</i>+RBS+<i>ydcD</i>.

BBa_K531006
BBa_K531006 Version 1 (Component)
Optimized esp gene for <i>C. crescentus</i>

BBa_K733013
BBa_K733013 Version 1 (Component)
<i>Pveg</i>+R.B.S.

BBa_K733006
BBa_K733006 Version 1 (Component)
<i>ydjM</i>+<i>Bmp2</i>

BBa_K530019
BBa_K530019 Version 1 (Component)
HHO1 Yeast UTR

BBa_K733012
BBa_K733012 Version 1 (Component)
<i>xylR</i>+<i>PxylA</i>+RBS+<i>ydcE</i>+<i>Ptms</i>+RBS+<i>ydcD</i>: Cell Growth Inhibition Device

BBa_K733014
BBa_K733014 Version 1 (Component)
<i>Pveg</i>+RBS+<i>ydjM</i>+<i>Bmp2</i>

Terminal D
BBa_K1354002 Version 1 (Component)
Bovine Terminal Deoxynucleotidyl Transferase: codon optimized for expression in E. coli

BtGal1
BBa_K1489001 Version 1 (Component)
Bovine Galectin-1

BBa_K1728020
BBa_K1728020 Version 1 (Component)
Rhodopsin signaling peptide (bovine)