SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
CreBBa_J61047 Version 1 (Component)Cre DNA recombinase
PspaSPspaS_core Version (Component) BBa_K208014BBa_K208014 Version 1 (Component)GFP (Silver Fusion)/Double Terminator
BBa_K1680020BBa_K1680020 Version 1 (Component)Cre-dronpa fusion
BBa_K1680019BBa_K1680019 Version 1 (Component)Cre-dronpa fusion
BBa_K1680018BBa_K1680018 Version 1 (Component)Cre-Dronpa fusion
BBa_K1680017BBa_K1680017 Version 1 (Component)Cre-Dronpa Fusion
pREBBa_K116603 Version 1 (Component)pRE promoter from λ phage
BBa_I15010BBa_I15010 Version 1 (Component)cph8 (Cph1/EnvZ fusion)
BBa_E0051BBa_E0051 Version 1 (Component)lacZa.GFP fusion
BBa_K125500BBa_K125500 Version 1 (Component)GFP fusion brick
REBBa_J3101 Version 1 (Component)Recombinational Enhancer (RE) for Hin/Hix inverting
BBa_K1680021BBa_K1680021 Version 1 (Component)Dronpa caged Cre with NLS
BBa_K1680023BBa_K1680023 Version 1 (Component)Dronpa caged Cre with NLS
BBa_K1680024BBa_K1680024 Version 1 (Component)Dronpa caged Cre with NLS
BBa_K1680022BBa_K1680022 Version 1 (Component)Dronpa caged Cre with NLS
yfpBBa_K165005 Version 1 (Component)Venus YFP, yeast optimized for fusion
XreBO_10661 Version 1 (Component) creBBa_K112102 Version 1 (Component)Cre enzyme without start or stop codons
pET fusionBBa_K1122673 Version 1 (Component)Ethanol production module
BBa_K1114107BBa_K1114107 Version 1 (Component)Bicistronic Design RBS 2, MoClo Format with BC fusion sites
BBa_K249006BBa_K249006 Version 1 (Component)Fusion EYFP with C-terminal Arginine Tag
mCherryBBa_K165004 Version 1 (Component)mCherry, yeast optimized for fusion
fusionBBa_I12200 Version 1 (Component)Lambda cI - Gal4 fusion protein
BBa_K1680006BBa_K1680006 Version 1 (Component)Fluorescent protein dronpa
CHEBBa_K256023 Version 1 (Component)Cholesteryl Esterase (CHE)
cph8BBa_K592000 Version 1 (Component)cph8 (Cph1/EnvZ fusion)
CRPBBa_J58112 Version 1 (Component)CRP protein
BBa_I718008BBa_I718008 Version 1 (Component)araC-pBad-rbs-cre
CreBBa_I716438 Version 1 (Component){rbs1-A}{GTG.Cre}{b0015 TT}
CWEBBa_K1362433 Version 1 (Component)CWE (extein)
FusionBBa_I12201 Version 1 (Component)Alpha-NTD - Gal11p fusion protein
BBa_K255000BBa_K255000 Version 1 (Component)laci-cfp fusion
CreABBa_I715000 Version 1 (Component)Amino Half of Cre Recombinase (aka CreA)
CreBBBa_I715001 Version 1 (Component)Carboxl Half of Cre Recombinase (aka CreB)
BBa_K208006BBa_K208006 Version 1 (Component)HlyA Signal Peptide - Silver Fusion Compatible
BBa_K1321002BBa_K1321002 Version 1 (Component)Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25
BBa_K1045010BBa_K1045010 Version 1 (Component)RBS BBa_B0034 with inversed Pre- and Suffix
SgsE | CFPBBa_K525306 Version 1 (Component)Fusion Protein of S-Layer SgsE and mCerulean
SbpA | CFPBBa_K525406 Version 1 (Component)Fusion Protein of S-Layer SbpA and mCerulean
SgsE | YFPBBa_K525305 Version 1 (Component)Fusion Protein of S-Layer SgsE and mCitrine
BBa_K1321003BBa_K1321003 Version 1 (Component)Re-entry of BBa_K863101, Cellulose Binding Domain CBDcex in rfc25
BBa_K1740000BBa_K1740000 Version 1 (Component)Dronpa 145N ORF (E. coli optimized)
BBa_K1641042BBa_K1641042 Version 1 (Component)Fusion protein of Cre-EGFP, with RBS at the beginning