iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
RFP-BA-BbsBBa_K349003 Version 1 (Component)RFP-BA-BbsI (for construction of BA BioBytes 2.0)
KanR-BA-BfBBa_K349012 Version 1 (Component)KanR-BA-BfuAI (for construction of BA BioBytes 2.0)
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
Kan-BA-BbsBBa_K349010 Version 1 (Component)KanR-BA-BbsI (for construction of BA BioBytes 2.0)
KanR-BA-BsBBa_K349008 Version 1 (Component)KanR-BA-BsaI (for construction of BA BioBytes 2.0)
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
RFP-BA-BsaBBa_K349002 Version 1 (Component)RFP-BA-BsaI (for construction of BA BioBytes 2.0)
BBa_J56012BBa_J56012 Version 1 (Component)Invertible sequence of dna includes Ptrc promoter
FurBO_11498 Version 1 (Component) KanR-AB-BfBBa_K349011 Version 1 (Component)KanR-AB-BfuAI (for construction of AB BioBytes 2.0)
ampR-BABBa_K349302 Version 1 (Component)ampR-BA (BioBytes 2.0)
tetR-BABBa_K349303 Version 1 (Component)tetR-BA (BioBytes 2.0)
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
kanRBBa_P1003 Version 1 (Component)kanamycin resistance cassette
RFP-AB-BfuBBa_K349005 Version 1 (Component)RFP-AB-BfuAI (for construction of AB BioBytes 2.0)
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
KanR-AB-BsBBa_K349007 Version 1 (Component)KanR-AB-BsaI (for construction of AB BioBytes 2.0)
KanR-AB-BbBBa_K349009 Version 1 (Component)KanR-AB-BbsI (for construction of AB BioBytes 2.0)
pSC101BBa_I50041 Version 1 (Component)pSC101 origin of replication, reverse
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
RFP-BA-BfuBBa_K349006 Version 1 (Component)RFP-BA-BfuAI (for construction of BA BioBytes 2.0)
BBa_K1172904BBa_K1172904 Version 1 (Component)Rnase Ba (Barnase) from Bacillus amyloliquefaciens
BBa_K349004BBa_K349004 Version 1 (Component)RFP BbsI BA (for Construction of AB Type Bytes-v2)
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
RFP-AB-BsaBBa_K349001 Version 1 (Component)RFP-AB-BsaI (for construction of AB BioBytes 2.0)
BBa_K227006BBa_K227006 Version 1 (Component)puc BA coding region of R. sphaeroides
kanBBBa_K349301 Version 1 (Component)kanR-BA (BioBytes 2.0)
BBa_K187034BBa_K187034 Version 1 (Component)pAB/BA reverse primer for sequencing
BBa_K187033BBa_K187033 Version 1 (Component)pAB/BA forward primer for sequencing
BBa_K1995012BBa_K1995012 Version 1 (Component)BA (merA coding sequence)
OriTRBBa_J01003 Version 1 (Component)OriT-R (Origin of transfer for the R-plasmid nic region)
BBa_K132000BBa_K132000 Version 1 (Component)RBS+kanR+LVA
BBa_K187427BBa_K187427 Version 1 (Component)Origin in BA, Reverse primer