Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
aiiABBa_C0060 Version 1 (Component)autoinducer inactivation enzyme from Bacillus; hydrolyzes acetyl homoserine lactone
BBa_K1696003BBa_K1696003 Version 1 (Component)L-lactate producing part1
ldhE-LcBBa_K1696001 Version 1 (Component)L-Lactate producing module from Lactobacillus casei
BBa_K1696004BBa_K1696004 Version 1 (Component)L-lactate producing part2
BBa_K914003BBa_K914003 Version 1 (Component)L-rhamnose-inducible promoter (pRha)
BBa_K1676076BBa_K1676076 Version 1 (Component)Lactate Permease
BBa_K1696002BBa_K1696002 Version 1 (Component)L-Lactate producing module from Geobacillus stearothermophilus
BBa_K117000BBa_K117000 Version 1 (Component)Lysis gene (promotes lysis in colicin-producing bacteria strain)
BBa_K209402BBa_K209402 Version 1 (Component)AarI A-B part, signal sequence-FLAG-YFP [SSFYFP]
BBa_K1122700BBa_K1122700 Version 1 (Component)L lactate dehydrogenase (L-LDH)
BBa_K1696009BBa_K1696009 Version 1 (Component)Lactate sensing system
BBa_S03119BBa_S03119 Version 1 (Component)--Specify Parts List--
TVEL5BBa_K1615067 Version 1 (Component)Laccase TVEL5 in RFC25
BBa_K518004BBa_K518004 Version 1 (Component)IPTG-inducible L-Asp producing device
BBa_K1696011BBa_K1696011 Version 1 (Component)Riboflavin producing parts
BBa_K177000BBa_K177000 Version 1 (Component)Bistable_I part L
BBa_K1695000BBa_K1695000 Version 1 (Component)Tightly-regulated lactose-inducible promoter
ATF1BBa_J45014 Version 1 (Component)alcohol acetyltransferase I; converts isoamyl alcohol to isoamyl acetate (banana odor)
BBa_K1148014BBa_K1148014 Version 1 (Component)promoter hlbA from L. bulgaricus
BBa_K209400BBa_K209400 Version 1 (Component)AarI B-C part, hM4D
BBa_J70042BBa_J70042 Version 1 (Component)6his part for use with BioScaffold parts ATG-6his-GGATCC (glycine serine)
BBa_K1690003BBa_K1690003 Version 1 (Component)Mating pheromone (L. elongisporus)
BBa_K1497007BBa_K1497007 Version 1 (Component)Naringenin producing operon
BBa_K1440088BBa_K1440088 Version 1 (Component)long parts consist of part2 and part3
BBa_K863021BBa_K863021 Version 1 (Component)bhal laccase from Bacillus halodurans
BBa_K2033008BBa_K2033008 Version 1 (Component)N-3-oxo-tetradecanoyl-L-Homoserine lactone* Sender- SinI
BBa_K2033000BBa_K2033000 Version 1 (Component)N-dodecanoyl-L-homoserine lactone (C(12)-HSL) Sender- AubI
BBa_K863001BBa_K863001 Version 1 (Component)bpul laccase from Bacillus pumilus
BBa_K863006BBa_K863006 Version 1 (Component)ecol laccase from E. coli
BBa_K863011BBa_K863011 Version 1 (Component)tthl laccase from Thermus thermophilus
BBa_K1676098BBa_K1676098 Version 1 (Component)Mutant 1 of Lactate Permease Expression Part
BBa_K325210BBa_K325210 Version 1 (Component)Red Firefly Luciferase and LRE<BR><i>L. Cruciata<BR>(E. coli optimised)</i>
BBa_K200006BBa_K200006 Version 1 (Component)OtsB: Part 2 of 2 coding for trehalose producing enzymes
BBa_K1676112BBa_K1676112 Version 1 (Component)Wildtype Lactate Dehydrogenase
LDHABBa_K1154003 Version 1 (Component)Homo sapiens lactate dehydrogenase A (LDHA)
BBa_K1331003BBa_K1331003 Version 1 (Component)RhlI Acyl-homoserine-lactone synthase from P.aeruginosa SQ6
tetA(L)BO_32327 Version 1 (Component) BBa_K284000BBa_K284000 Version 1 (Component)Lactate Permease from Kluyveromyces lactis
BBa_K2116048BBa_K2116048 Version 1 (Component)Lactate Hybrid Promoter
BBa_J70044BBa_J70044 Version 1 (Component)6his part for use with BioScaffold parts (G)GATCC(glycine serine)-6his-TAA
BBa_K1676099BBa_K1676099 Version 1 (Component)Wildtype Lactate Permease and Lactate Dehydrogenase Operon