Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
MCSMCS Version 1 (Component) Amp CasBBa_I13800 Version 1 (Component)Ampicillin Resistance Cassette
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
lacZ-alphaBBa_I732006 Version 1 (Component)lacZ alpha fragment
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
BBa_J56012BBa_J56012 Version 1 (Component)Invertible sequence of dna includes Ptrc promoter
BBa_K1796103BBa_K1796103 Version 1 (Component)M Chain of CODH/ACS alpha subunit
BBa_P10599BBa_P10599 Version 1 (Component)GoldenBraid destination vector alpha insert
pSC101BBa_I50041 Version 1 (Component)pSC101 origin of replication, reverse
BBa_K1796102BBa_K1796102 Version 1 (Component)A chain of CODH/ACS beta subunit
BAT2BBa_J45008 Version 1 (Component)branched-chain amino acid transaminase (BAT2); converts leucine to alpha-ketoisocaproate
BBa_M36715BBa_M36715 Version 1 (Component)mmoX (methane monooxygenase subunit A, alpha chain)
"M"BBa_K1080004 Version 1 (Component)ChlM
BBa_I732092BBa_I732092 Version 1 (Component)Double Repoters (LacZ-alpha and RFP)
BBa_K1952002BBa_K1952002 Version 1 (Component)Hydrazine Synthase alpha subunit
Bt-ALDHBBa_K398006 Version 1 (Component)Medium-Chain Aldehyde Dehydrogenase
M-BBBa_K774001 Version 1 (Component)Mammalian-Bacterial Promoter: E9-ns2 CArG promoter sequence + BHN + BBaK216005
BBa_K1391001BBa_K1391001 Version 1 (Component)Gantenerumab Variable Human Ig-M Light Chain
BBa_K1391000BBa_K1391000 Version 1 (Component)Gantenerumab Variable Human Ig-M Heavy Chain
B-MBBa_K774000 Version 1 (Component)Bacterial-Mammalian Promoter: BBaK216005 + BHN + CArG promoter sequence E9-ns2
BBa_K539714BBa_K539714 Version 1 (Component)kivd (alpha-ketoisovalerate decarboxylase)
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
BBa_K2091000BBa_K2091000 Version 1 (Component)Protocatechuate 3,4-dioxygenase Alpha Subunit
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
RFP2BBa_I715023 Version 1 (Component)Carboxyl portion of RFP
BBa_K1582035BBa_K1582035 Version 1 (Component)Linker+inJanus-m
BBa_K103008BBa_K103008 Version 1 (Component)TEM-1 beta-lactamase subunit alpha with linker
BBa_M36718BBa_M36718 Version 1 (Component)mmoY (methane monooxygenase subunit A, beta chain)
BBa_M36721BBa_M36721 Version 1 (Component)mmoZ (methane monooxygenase subunit A, gamma chain)
BBa_I714031BBa_I714031 Version 1 (Component)OriT-R (Origin of Transfer for the R751-plasmid nic region)
lacZ aBBa_E0033 Version 1 (Component)LacZ alpha fragment; complements matching N-terminal deletion mutant (lacZ-omega)
BBa_J92012BBa_J92012 Version 1 (Component)M. Ruminantium RNA polymerase Subunit P
BBa_J92016BBa_J92016 Version 1 (Component)M. Ruminantium RNA Polymerase Subunit H
BBa_J92017BBa_J92017 Version 1 (Component)M. Ruminantium RNA Polymerase Subunit K
BBa_J92010BBa_J92010 Version 1 (Component)M. Ruminantium RNA Polymerase Subunit L