SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
cI lamBBa_R1051 Version 1 (Component)Promoter, Standard (lambda cI regulated)<br>
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
BBa_K1051000BBa_K1051000 Version 1 (Component)Stop codon free RFP in RFC[23] standard
BBa_K1321339BBa_K1321339 Version 1 (Component)CBDcenA+Linker, RFC 25 standard
lux pRBBa_R1062 Version 1 (Component)Promoter, Standard (luxR and HSL regulated -- lux pR)<br>
BBa_K648013BBa_K648013 Version 1 (Component)GFP with Standard 25 Prefix/Suffix
BBa_K1051004BBa_K1051004 Version 1 (Component)Stop codon free mOrange in RFC[23] standard
BBa_K358001BBa_K358001 Version 1 (Component)Measurement Standard
BBa_K1051002BBa_K1051002 Version 1 (Component)Stop codon free EYFP in RFC[23] standard
BBa_K929301BBa_K929301 Version 1 (Component)Potsdam Standard Backbone
BBa_J95049BBa_J95049 Version 1 (Component)Terminator measurement reference standard (B0015)
HisBBa_K157011 Version 1 (Component)His affinity tag; Freiburg standard
BBa_K1051001BBa_K1051001 Version 1 (Component)Stop codon free ECFP in RFC[23] standard
linkerBBa_K157009 Version 1 (Component)Split fluorophore linker; Freiburg standard
BBa_K157012BBa_K157012 Version 1 (Component)Strep affinity tag II; Freiburg standard
BBa_K929302BBa_K929302 Version 1 (Component)AID in Potsdam Standard
BBa_J95030BBa_J95030 Version 1 (Component)BioBrick terminator measurement standard for Rhodobacter sphaeroides
RFC105 CCBBa_K1362419 Version 1 (Component)C-terminal splicing overhang CAAC=1/3?+Asn RFC[105] standard overhang CC
cI 434BBa_R1052 Version 1 (Component)Promoter, Standard (434 cI regulated)<br>
BBa_J95042BBa_J95042 Version 1 (Component)Promoter measurement standard (B1009) for E coli
BBa_K173002BBa_K173002 Version 1 (Component)J23118 measurement system
BBa_K398331BBa_K398331 Version 1 (Component)pCaiF-B0032 measurement device
cI HK022BBa_R1050 Version 1 (Component)Promoter, Standard (HK022 cI regulated) <br>
BBa_K648011BBa_K648011 Version 1 (Component)Standard 25-Ready Xyle Reporter
BBa_J95045BBa_J95045 Version 1 (Component)reference standard for Promoter measurement (B0015) for E coli
BBa_K392008BBa_K392008 Version 1 (Component)C. firmi beta-glucosidase (Silver standard compatible)
BBa_J95031BBa_J95031 Version 1 (Component)BioBrick promoter and RBS measurement reference standard for R. sphaeroides
BBa_K1051257BBa_K1051257 Version 1 (Component)Construct the measurement pathway of K1051206.
BBa_K1051258BBa_K1051258 Version 1 (Component)Construct the measurement pathway of K1051207.
BBa_K1051259BBa_K1051259 Version 1 (Component)Construct the measurement pathway of K1051208.
BBa_K300005BBa_K300005 Version 1 (Component)GFP (Silver Standard Prefix) with terminator
BBa_K404319BBa_K404319 Version 1 (Component)Cyan fluorescent protein (CFP) in RFC25 standard
BBa_K392006BBa_K392006 Version 1 (Component)C. firmi CenA (Silver standard compatible)
BBa_K121016BBa_K121016 Version 1 (Component)Tokyo Standard prefix suffix RBS
BBa_K1824890BBa_K1824890 Version 1 (Component)The Sequence of the SpeI/XbaI scar in BioBricks standard assembly.
BBa_K1351012BBa_K1351012 Version 1 (Component)spaS Subtilin (antimicrobial peptide, Freiburg standard)
BBa_K648012BBa_K648012 Version 1 (Component)LacZa wtih Standard 25 Prefix/Suffix
BBa_K392007BBa_K392007 Version 1 (Component)C. firmi Cex (Silver standard compatible)
BBa_J107022BBa_J107022 Version 1 (Component)R0061 measurement system
BBa_K112000BBa_K112000 Version 1 (Component)T4 holin, complete CDS, berkeley standard
BBa_J107023BBa_J107023 Version 1 (Component)R0061 measurement system (with RFP)
linkerBBa_K365005 Version 1 (Component)20 aa linker RFC-25 (fusion standard Freiburg)