Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J61101BBa_J61101 Version 1 (Component)Ribosome Binding Site Family Member
BBa_K2027052BBa_K2027052 Version 1 (Component)Flag-Lumio-HisTag
BBa_J61120BBa_J61120 Version 1 (Component)Ribosome Binding Site Family Member
BBa_K1321340BBa_K1321340 Version 1 (Component)Double CBD (dCBD) with N-terminal linker
BBa_K2027011BBa_K2027011 Version 1 (Component)Melanin-Binding Heptapeptide (4D) with CBD and Flag-Lumio-HisTag
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_J61100BBa_J61100 Version 1 (Component)Ribosome Binding Site Family Member
BBa_K209402BBa_K209402 Version 1 (Component)AarI A-B part, signal sequence-FLAG-YFP [SSFYFP]
BBa_K2027010BBa_K2027010 Version 1 (Component)Repetitive Insertion of 4D Melanin-Binding Heptapeptide
PBS_F24PBS_F24 Version 1 (Component) HisTagBBa_J18909 Version 1 (Component)His tag (6xHis; E. coli - optimized)
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
BBa_K1462501BBa_K1462501 Version 1 (Component)GBD domian + Linker
His-ScaffoBBa_K1602027 Version 1 (Component)Protein scaffold with N-terminal HisTag
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
BBa_K228000BBa_K228000 Version 1 (Component)T7ptag(T7polymerase with amber mutation)
RBS-RFPBBa_K093005 Version 1 (Component)RFP with RBS
BBa_K1321002BBa_K1321002 Version 1 (Component)Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25
BBa_K1333005BBa_K1333005 Version 1 (Component)M13 bacteriophage g8p with a FLAG tag on C-terminal
RBS-spoVGBBa_K143021 Version 1 (Component)SpoVG ribosome binding site (RBS) for B. subtilis
BBa_K2066527BBa_K2066527 Version 1 (Component)B0034 with scar TACTAG
BBa_K1321003BBa_K1321003 Version 1 (Component)Re-entry of BBa_K863101, Cellulose Binding Domain CBDcex in rfc25
BBa_K2027033BBa_K2027033 Version 1 (Component)BlitzenBlue-Cellulose Binding Domain-Flag-Lumio-His-tag Fusion Protein
BBa_K2027027BBa_K2027027 Version 1 (Component)CupidPink-Cellulose Binding Domain-Flag-Lumio-His-tag Fusion Protein
BBa_K2027042BBa_K2027042 Version 1 (Component)ScoogeOrange-Cellulose Binding Domain-Flag-Lumio-His-tag Fusion Protein
BBa_K2027035BBa_K2027035 Version 1 (Component)LeorOrange-Cellulose Binding Domain-Flag-Lumio-His-tag Fusion Protein
BBa_K2027043BBa_K2027043 Version 1 (Component)SeraphinaPink-Cellulose Binding Domain-Flag-Lumio-His-tag Fusion Protein
BBa_K2027032BBa_K2027032 Version 1 (Component)DonnerMagenta-Cellulose Binding Domain-Flag-Lumio-His-tag Fusion Protein
BBa_K2027028BBa_K2027028 Version 1 (Component)PrancerPurple-Cellulose Binding Domain-Flag-Lumio-His-tag Fusion Protein
BBa_K2027031BBa_K2027031 Version 1 (Component)VirginiaViolet-Cellulose Binding Domain-Flag-Lumio-His-tag Fusion Protein
BBa_K2027029BBa_K2027029 Version 1 (Component)VixenPurple-Cellulose Binding Domain-Flag-Lumio-His-tag Fusion Protein
BBa_K2027041BBa_K2027041 Version 1 (Component)DreidelTeal-Cellulose Binding Domain-Flag-Lumio-His-tag Fusion Protein
BBa_K2027030BBa_K2027030 Version 1 (Component)TinselPurple-Cellulose Binding Domain-Flag-Lumio-His-tag Fusion Protein
BBa_K2027034BBa_K2027034 Version 1 (Component)MaccabeePurple-Cellulose Binding Domain-Flag-Lumio-His-tag Fusion Protein
PfadRBBa_K861060 Version 1 (Component)PfadR, synthetic promoter with tandem FadR binding site
BBa_K1051006BBa_K1051006 Version 1 (Component)Saccharomycescerevisiae TBY-1 terminator with stopcodon
BBa_K1321009BBa_K1321009 Version 1 (Component)Nickel Binding Protein (NiBP) Freiburg format (RFC[25])
BBa_J61127BBa_J61127 Version 1 (Component)Ribosome Binding Site Family Member
BBa_K1585999BBa_K1585999 Version 1 (Component)lacI binding site