iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Reverse Orientation Sequence Pullreverse_orientation Version 1 (Activity)Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
SpacerSpacer Version 1 (Component) SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
BBa_K2066019BBa_K2066019 Version 1 (Component)UNS 3 Sequence, from Torella et al., 2013
BBa_K2116095BBa_K2116095 Version 1 (Component)Pconst with 3 esaboxes and 8bp spacers
const.BBa_R1075 Version 1 (Component)Constitutive Promoter II
BBa_K2116996BBa_K2116996 Version 1 (Component)Pconst with 3 esaboxes and 15bp spacers
spacerBBa_B0040 Version 1 (Component)Spacer.1 (generic)
Prm +BBa_I12007 Version 1 (Component)Modified lambda Prm promoter (OR-3 obliterated)
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
BBa_K228000BBa_K228000 Version 1 (Component)T7ptag(T7polymerase with amber mutation)
RBS-RFPBBa_K093005 Version 1 (Component)RFP with RBS
BBa_K2066527BBa_K2066527 Version 1 (Component)B0034 with scar TACTAG
BBa_K2066503BBa_K2066503 Version 1 (Component)8BP Spacer from UNSX
BBa_K1051006BBa_K1051006 Version 1 (Component)Saccharomycescerevisiae TBY-1 terminator with stopcodon
BBa_K1824889BBa_K1824889 Version 1 (Component)A Transcriptional Spacer Sequence
BBa_K315004BBa_K315004 Version 1 (Component)variant forward lox site with 3 base changes in the spacer region (loxm2 forward)
BBa_K2116090BBa_K2116090 Version 1 (Component)Spacer for BB assembly
RBS_cassetteRBS_cassette Version 1 (Component)AvrII restriction site (cctagg), overlapped with RBS (aggagga)
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
HP3 3BBa_B0101 Version 1 (Component)HP3 3
BBa_J23201BBa_J23201 Version 1 (Component)Ser2-tRNA key with 5bp spacer
BBa_J23202BBa_J23202 Version 1 (Component)Ser2-tRNA key with 7bp spacer
BBa_J23203BBa_J23203 Version 1 (Component)Ser2-tRNA key with 9bp spacer
mCherryBBa_J06702 Version 1 (Component)mCherry, bacterial with RBS and forward terminator
BBa_K360031BBa_K360031 Version 1 (Component)Strong RBS with spacer.
BBa_K1321340BBa_K1321340 Version 1 (Component)Double CBD (dCBD) with N-terminal linker
BBa_K309012BBa_K309012 Version 1 (Component)Unc-54 3' UTR (for use in C. elegans chassis)
pCon 0.36BBa_K176009 Version 1 (Component)constitutive promoter family member J23107 actual sequence (pCon 0.36)
BBa_I759002BBa_I759002 Version 1 (Component)pTet-spacer-cro
GFPBBa_K145015 Version 1 (Component)GFP with LVA tag
BBa_K315012BBa_K315012 Version 1 (Component)LoxBri (F) Variant forward lox site with 3 base changes in the spacer region
8BEBBa_K590056 Version 1 (Component)RrD_C70K-PSB1C3-High constitutive
const.BBa_R1074 Version 1 (Component)Constitutive Promoter I
H6BBa_K1362442 Version 1 (Component)His6 tag with spacers
BBa_K1051008BBa_K1051008 Version 1 (Component)S. cerevisiae CAA terminator with stopcodon
pCon 0.15BBa_K176008 Version 1 (Component)constitutive promoter family member J23115 actual sequence (pCon 0.15)
BBa_I759001BBa_I759001 Version 1 (Component)pTet-spacer-N
BBa_K611097BBa_K611097 Version 1 (Component)LVA Tag, Double Stop Codon, Truncated Barcode (3' -8bp)