Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

ACS Synbio Generation
ACS_Synbio_Generation Version 1 (Activity)
Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project

iGEM to SBOL conversion
igem2sbol Version 1 (Activity)
Conversion of the iGEM parts registry to SBOL2.1

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Composite Sequence Pull
Composite Version 1 (Activity)
When multiple sources where combined to make a new part.

Scar 25
BBa_B0105 Version 1 (Component)
RFC 25 Scar Sequence

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_J04450
BBa_J04450 Version 1 (Component)
RFP Coding Device

Scar25 ATG
BBa_K1319106 Version 1 (Component)
RFC 25 Translation Start Scar Sequence

BBa_K1159012
BBa_K1159012 Version 1 (Component)
Secretory Catechol-2,3-dioxygenase (SERK-SigP_XylE) in RFC[25] N-Part

BBa_K1051000
BBa_K1051000 Version 1 (Component)
Stop codon free RFP in RFC[23] standard

BBa_K1051003
BBa_K1051003 Version 1 (Component)
Stop codon free GFP in RFC[23] standard

BBa_K1159008
BBa_K1159008 Version 1 (Component)
Secretory Catechol-2,3-dioxygenase (IgKappa-SigP_XylE) in RFC[25] N-Part

RFC 37
BBa_K245009 Version 1 (Component)
RFC 37 Scar Sequence

BBa_K316003
BBa_K316003 Version 1 (Component)
XylE - catechol 2,3-dioxygenase from P.putida with terminator

BBa_K1321005
BBa_K1321005 Version 1 (Component)
Synthetic Phytochelatin EC(20) RFC[25]

BBa_K1321337
BBa_K1321337 Version 1 (Component)
sfGFP in Freiburg format (RFC 25)

mCherry
BBa_J06504 Version 1 (Component)
monomeric RFP optimized for bacteria

BBa_I15008
BBa_I15008 Version 1 (Component)
heme oxygenase (ho1) from Synechocystis

BBa_K1321339
BBa_K1321339 Version 1 (Component)
CBDcenA+Linker, RFC 25 standard

BBa_K1159204
BBa_K1159204 Version 1 (Component)
Secretory SpyCatcher (SERK-SigP_SpyCatcher) in RFC[25] N-Part

BBa_K1159205
BBa_K1159205 Version 1 (Component)
Secretory SpyTag (SERK-SigP_SpyTag) in RFC[25] N-Part

BBa_K1321009
BBa_K1321009 Version 1 (Component)
Nickel Binding Protein (NiBP) Freiburg format (RFC[25])

BBa_K1159011
BBa_K1159011 Version 1 (Component)
Secretory Laccase (SERK-SigP_Laccase) in RFC[25] N-Part

BBa_K1159018
BBa_K1159018 Version 1 (Component)
Membrane-anchored Catechol-2,3-dioxygenase (XylE) in RFC[25] N-Part

BBa_K1159006
BBa_K1159006 Version 1 (Component)
Secretory NanoLuc Luciferase (IgKappa-SigP_nLuc) in RFC[25] N-Part

BBa_K1159010
BBa_K1159010 Version 1 (Component)
Secretory NanoLuc Luciferase (SERK-SigP_nLuc) in RFC[25] N-Part

BBa_K1159013
BBa_K1159013 Version 1 (Component)
Secretory Human Protein Phosphatase 1 (SERK-SigP_PP1) in RFC[25] N-Part

BBa_K1159009
BBa_K1159009 Version 1 (Component)
Secretory Erythromycin Esterase Type II (SERK-SigP_EreB) in RFC[25] N-Part

BBa_K1321011
BBa_K1321011 Version 1 (Component)
SmtA metallothionein in Freiburg format (RFC[25])

BBa_K1159303
BBa_K1159303 Version 1 (Component)
Signal Peptide of SERK Receptor from <i>Physcomitrella patens</i> in RFC[25]

BBa_K808033
BBa_K808033 Version 1 (Component)
araC-Pbad regulated XylE - catechol 2,3-dioxygenase from P.putida with terminator

BBa_K1051004
BBa_K1051004 Version 1 (Component)
Stop codon free mOrange in RFC[23] standard

BBa_K1159203
BBa_K1159203 Version 1 (Component)
Secretory SpyTag (IgKappa-SigP_SpyTag) in RFC[25] N-Part

BBa_K1159202
BBa_K1159202 Version 1 (Component)
Secretory SpyCatcher (IgKappa-SigP_SpyCatcher) in RFC[25] N-Part

BBa_K1321347
BBa_K1321347 Version 1 (Component)
dCBD with N-terminal linker in RFC 25

BBa_K2088000
BBa_K2088000 Version 1 (Component)
catechol 2,3-dioxygenase gene

rhII
BBa_C0070 Version 1 (Component)
autoinducer synthetase for N-butyryl-HSL (BHL) and HHL

BBa_K331010
BBa_K331010 Version 1 (Component)
Catechol 2,3-dioxygenase with a N-terminus arginine tag

BBa_K1321012
BBa_K1321012 Version 1 (Component)
fMT metallothionein in Freiburg format (RFC[25])

BBa_K1159211
BBa_K1159211 Version 1 (Component)
Secretory SpyCatcher_nLuc fusion (IgKappa-SigP_SpyCatcher_nLuc) in RFC[25] N-Part

BBa_K1159210
BBa_K1159210 Version 1 (Component)
Secretory nLuc_SpyCatcher fusion (IgKappa-SigP_nLuc_SpyCatcher) in RFC[25] N-Part

BBa_K1159209
BBa_K1159209 Version 1 (Component)
Secretory nLuc_SpyTag fusion (IgKappa-SigP_nLuc_SpyTag) in RFC[25] N-Part

BBa_K1159208
BBa_K1159208 Version 1 (Component)
Secretory SpyTag_nLuc fusion (IgKappa-SigP_SpyTag_nLuc) in RFC[25] N-Part

BBa_K1321342
BBa_K1321342 Version 1 (Component)
sfGFP fused to CBDcex in RFC 25

RFC105 A
BBa_K1362414 Version 1 (Component)
N-terminal start overhang (T)(A)-(G)ATG=RBS+Start RFC[105] A

BsaI ->
BBa_K1362425 Version 1 (Component)
BsaI restriction site for RFC[???] cloning (in part in prefix)

BBa_K1159007
BBa_K1159007 Version 1 (Component)
Secretory Laccase (IgKappa-SigP_Laccase) in RFC[25] N-Part