mCherry
mCherry Version 1 (Unknown)
Organism: Cryptococcus neoformans serotype A H99S strain

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

ACS Synbio Generation
ACS_Synbio_Generation Version 1 (Activity)
Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project

Direct Sequence Pull
direct Version 1 (Activity)
Used to indicate that a sequence was pulled directly from a source with no alterations made

Sequence Cut Out of Plasmid
cut_out_of_plasmid Version 1 (Activity)
Used to indicate that a sequence was cut out of the plasmid referenced as the source

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Reverse Orientation Sequence Pull
reverse_orientation Version 1 (Activity)
Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission

Unknown Alteration Sequence Pull
Unknown Version 1 (Activity)
Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown

pBad/araC
BBa_I0500 Version 1 (Component)
Inducible pBad/araC promoter

Codon Optimised Sequence Pull
codon_optimisation Version 1 (Activity)
Used to indicate that a sequence was codon optimised after pulling from the source and before submission

Amp Cas
BBa_I13800 Version 1 (Component)
Ampicillin Resistance Cassette

mCherry
BBa_J06504 Version 1 (Component)
monomeric RFP optimized for bacteria

P(Lac) IQ
BBa_I14032 Version 1 (Component)
promoter P(Lac) IQ

BBa_B0033
BBa_B0033 Version 1 (Component)
RBS.4 (weaker) -- derivative of BBa_0030

BBa_J04500
BBa_J04500 Version 1 (Component)
IPTG inducible promoter with RBS

BBa_K1075027
BBa_K1075027 Version 1 (Component)
SplitSspB(Rapamycin inducable)-pLac-RBS34-mCherry-(Ec)ssrA(DAS+4)-TT

BBa_K864400
BBa_K864400 Version 1 (Component)
Ptac, trp & lac regulated promoter

BBa_K1075024
BBa_K1075024 Version 1 (Component)
RBS34- mCherry- (Ec)ssrA(DAS+4)-TT

BBa_K1075025
BBa_K1075025 Version 1 (Component)
pLac-RBS34-mCherry-(Ec)ssrA(DAS+4)-TT

BBa_J52008
BBa_J52008 Version 1 (Component)
luciferase: luciferin 2-monooxygenase from Renilla reniformis (EC 1.13.12.5; SwissProt:: P27652)

mCherry
BBa_J06702 Version 1 (Component)
mCherry, bacterial with RBS and forward terminator

BBa_K1075028
BBa_K1075028 Version 1 (Component)
SplitSspB(Rapamycin inducable)-pLac-RBS34-mCherry-TT

BBa_K1075043
BBa_K1075043 Version 1 (Component)
pLac-RBS32-mazE-(Ec)ssrA(DAS+4)-TT

BBa_K1075023
BBa_K1075023 Version 1 (Component)
mCherry- (Ec)ssrA(DAS+4)-TT

BBa_K1321005
BBa_K1321005 Version 1 (Component)
Synthetic Phytochelatin EC(20) RFC[25]

BBa_K1075041
BBa_K1075041 Version 1 (Component)
RBS32-MazE-(Ec)ssrA(DAS+4)

BBa_K1075026
BBa_K1075026 Version 1 (Component)
AraC-pBad-RBS34-mCherry-(Ec)ssrA(DAS+4)-TT

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Truncated Sequence Pull
Truncated Version 1 (Activity)
Used to indicate that a sequence was truncated after pulling from the source and before submission

mCherry
BBa_J06505 Version 1 (Component)
monomeric RFP optimized for bacteria

BBa_K1075042
BBa_K1075042 Version 1 (Component)
RBS32-MazE-(Ec)ssrA(DAS+4)-TT

BBa_K1075048
BBa_K1075048 Version 1 (Component)
AraC-pBAD-RBS32-mazF-TT-pLac-RBS32-mazE-(Ec)ssrA(DAS+4)-TT

BBa_K1075022
BBa_K1075022 Version 1 (Component)
mCherry- (Ec)ssrA(DAS+4)

mCherry
BBa_E2060 Version 1 (Component)
derivative of mRFP1, yeast-optimized

pLac
BBa_K1638000 Version 1 (Component)
Lac operator

ssrA(DAS+4
BBa_K1075020 Version 1 (Component)
E. coli ssrA(DAS+4)

BBa_K314103
BBa_K314103 Version 1 (Component)
Lac induced expression cassette

BBa_K773003
BBa_K773003 Version 1 (Component)
mCherry-LVA

BBa_K1075049
BBa_K1075049 Version 1 (Component)
AraC-pBAD-RBS32-sspB-TT-pLac-RBS34-mCherry-TT

BBa_K1075050
BBa_K1075050 Version 1 (Component)
pLac - RBS34 - mCherry - TT

BBa_K1789002
BBa_K1789002 Version 1 (Component)
RBS30

Ara
BBa_K808000 Version 1 (Component)
araC-Pbad - Arabinose inducible regulatory promoter/repressor unit

BBa_K1075021
BBa_K1075021 Version 1 (Component)
E. coli ssrA(DAS+4)-TT

BBa_K1075035
BBa_K1075035 Version 1 (Component)
pLac-RBS32-ccdA-ssrA-TT

kanR
BBa_P1003 Version 1 (Component)
kanamycin resistance cassette

mCherry
BBa_K165004 Version 1 (Component)
mCherry, yeast optimized for fusion

BBa_J33207
BBa_J33207 Version 1 (Component)
lac promoter and lacZ