Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
BBa_J61101BBa_J61101 Version 1 (Component)Ribosome Binding Site Family Member
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
BBa_J61120BBa_J61120 Version 1 (Component)Ribosome Binding Site Family Member
CreBBa_J61047 Version 1 (Component)Cre DNA recombinase
PspaSPspaS_core Version (Component) araCBBa_C0080 Version 1 (Component)araC arabinose operon regulatory protein (repressor/activator) from E. coli (+LVA)
BBa_K1321002BBa_K1321002 Version 1 (Component)Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25
BBa_K1321003BBa_K1321003 Version 1 (Component)Re-entry of BBa_K863101, Cellulose Binding Domain CBDcex in rfc25
BBa_J61100BBa_J61100 Version 1 (Component)Ribosome Binding Site Family Member
BBa_I13458BBa_I13458 Version 1 (Component)promoter C and arabinose C operon
BBa_J64950BBa_J64950 Version 1 (Component)cre operon entire
pREBBa_K116603 Version 1 (Component)pRE promoter from λ phage
REBBa_J3101 Version 1 (Component)Recombinational Enhancer (RE) for Hin/Hix inverting
BBa_K165002BBa_K165002 Version 1 (Component)Kozak sequence (yeast RBS)
T7 RBSBBa_K1362090 Version 1 (Component)strong T7 RBS
XreBO_10661 Version 1 (Component) BBa_K322123BBa_K322123 Version 1 (Component)Phycobilin synthesis operon without terminator
BBa_I746104BBa_I746104 Version 1 (Component)P2 promoter in agr operon from S. aureus
creBBa_K112102 Version 1 (Component)Cre enzyme without start or stop codons
Operon2BBa_K808007 Version 1 (Component)putative terephtalate uptake operon2
RBS-spoVGBBa_K143021 Version 1 (Component)SpoVG ribosome binding site (RBS) for B. subtilis
CHEBBa_K256023 Version 1 (Component)Cholesteryl Esterase (CHE)
CRPBBa_J58112 Version 1 (Component)CRP protein
BBa_K1179058BBa_K1179058 Version 1 (Component)Cre entry vector
BBa_I718008BBa_I718008 Version 1 (Component)araC-pBad-rbs-cre
CreBBa_I716438 Version 1 (Component){rbs1-A}{GTG.Cre}{b0015 TT}
CWEBBa_K1362433 Version 1 (Component)CWE (extein)
BBa_K909000BBa_K909000 Version 1 (Component)Phycocyanobilin synthesis operon
BBa_K415508BBa_K415508 Version 1 (Component)phEF1a L4R1 MammoBlock Entry Vector
CreABBa_I715000 Version 1 (Component)Amino Half of Cre Recombinase (aka CreA)
CreBBBa_I715001 Version 1 (Component)Carboxl Half of Cre Recombinase (aka CreB)
BBa_K1045010BBa_K1045010 Version 1 (Component)RBS BBa_B0034 with inversed Pre- and Suffix
BBa_K1499000BBa_K1499000 Version 1 (Component)wssF gene from wss operon
hycApBBa_K778000 Version 1 (Component)hycAp: Promoter of hyc operon activated by FhlA
creC RBSBBa_J64908 Version 1 (Component)RBS for creC in e coli operon
PrFeBBa_J3902 Version 1 (Component)PrFe (PI + PII rus operon)
BBa_K769020BBa_K769020 Version 1 (Component)lux operon(K769011) + lumP(K769019)
BBa_K769022BBa_K769022 Version 1 (Component)lux operon(K769011) + GFP(I13522)