iGEM Feature Libraries
igem_feature_libraries_collection Version 1 (Unknown)
A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).

Free Genes Feature Libraries
free_genes_feature_libraries_collection Version 1 (Unknown)
A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

ACS Synbio Generation
ACS_Synbio_Generation Version 1 (Activity)
Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project

iGEM to SBOL conversion
igem2sbol Version 1 (Activity)
Conversion of the iGEM parts registry to SBOL2.1

SyBiOntKB to SBOL conversion
SyBiOntKB2sbol Version 1 (Activity)
Conversion of the Synthetic Biology Ontology knowledge base to SBOL 2.1

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

Reverse Orientation Sequence Pull
reverse_orientation Version 1 (Activity)
Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission

Sequence Cut Out of Plasmid
cut_out_of_plasmid Version 1 (Activity)
Used to indicate that a sequence was cut out of the plasmid referenced as the source

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Direct Sequence Pull
direct Version 1 (Activity)
Used to indicate that a sequence was pulled directly from a source with no alterations made

Unknown Alteration Sequence Pull
Unknown Version 1 (Activity)
Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown

Sequence Pull with Mutations
mutations Version 1 (Activity)
Used to indicate that a sequence had mutations added after pulling from the source and before submission

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_B0032
BBa_B0032 Version 1 (Component)
RBS.3 (medium) -- derivative of BBa_0030

SEGA021
SEGA021 Version 1 (Component)
natural linear DNA.

SEGA022
SEGA022 Version 1 (Component)
natural linear DNA.

mRFP1
BBa_E1010 Version 1 (Component)
**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)

BBa_B0031
BBa_B0031 Version 1 (Component)
RBS.2 (weak) -- derivative of BBa_0030

BBa_K1077004
BBa_K1077004 Version 1 (Component)
natural fim switch OFF orientation

BBa_J04500
BBa_J04500 Version 1 (Component)
IPTG inducible promoter with RBS

BBa_K1632001
BBa_K1632001 Version 1 (Component)
fim switch[default OFF](Tokyo_Tech/J23119)

BBa_B0033
BBa_B0033 Version 1 (Component)
RBS.4 (weaker) -- derivative of BBa_0030

BBa_K1632005
BBa_K1632005 Version 1 (Component)
fim switch[default OFF](wild-type)

fimE IRL
BBa_K137010 Version 1 (Component)
fimE IRL

engfimS
BBa_K1077005 Version 1 (Component)
J23100 fim switch ON orientation

BBa_K137007
BBa_K137007 Version 1 (Component)
fimE

difF
BBa_I742101 Version 1 (Component)
dif site with forward orientation

BBa_K1632000
BBa_K1632000 Version 1 (Component)
fim switch[deault ON](Tokyo_Tech/J23119)

difR
BBa_I742102 Version 1 (Component)
dif site with reverse orientation

IRR
BBa_K137008 Version 1 (Component)
fimE IRR

BBa_K1077006
BBa_K1077006 Version 1 (Component)
nat fim switch b0034 GFP OFF orientation

BBa_K1632008
BBa_K1632008 Version 1 (Component)
fim switch[default OFF](wild-type)_rbs_gfp

BBa_J56012
BBa_J56012 Version 1 (Component)
Invertible sequence of dna includes Ptrc promoter

BBa_K1632003
BBa_K1632003 Version 1 (Component)
fim switch[default OFF](Tokyo_Tech/J23119)_rbs_gfp

BBa_K1077007
BBa_K1077007 Version 1 (Component)
J23100 fim switch b0034 amilCP ON orientation

fimIRR
BBa_K1077001 Version 1 (Component)
fim switch inverted repeat right IRR natural

fimIRL
BBa_K1077000 Version 1 (Component)
fim switch inverted repeat left IRL natural

BBa_K1632006
BBa_K1632006 Version 1 (Component)
fim switch[default ON](Tokyo_Tech/R0010)

BBa_K1850013
BBa_K1850013 Version 1 (Component)
pAra - fim

pSC101
BBa_I50041 Version 1 (Component)
pSC101 origin of replication, reverse

BBa_K1632011
BBa_K1632011 Version 1 (Component)
fimE (wild-type)

BBa_K1632010
BBa_K1632010 Version 1 (Component)
fimB (wild-type)

BBa_K137058
BBa_K137058 Version 1 (Component)
GFP fimE switch with 250 bp tetR promoter

BBa_K1632004
BBa_K1632004 Version 1 (Component)
fim switch[default ON](wild-type)

BBa_K1632031
BBa_K1632031 Version 1 (Component)
fim switch[default OFF](Tokyo_Tech/J23119)_rbs_gfp_rbs_rhlI

BBa_K1632033
BBa_K1632033 Version 1 (Component)
fim switch[default OFF](Tokyo_Tech/J23119)_rbs_gfp_rbs_lasI

ampR
BBa_P1006 Version 1 (Component)
ampicillin resistance cassette, reverse orientation

BBa_J64101
BBa_J64101 Version 1 (Component)
ColE1 biobrick plasmid with backward terminator