Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
BBa_K2068020BBa_K2068020 Version 1 (Component)orphan CdiA-CT/CdiI module of EC93
BBa_K2068018BBa_K2068018 Version 1 (Component)CdiA-CT orphan of EC93
BBa_K2068017BBa_K2068017 Version 1 (Component)CdiA-CT and CdiI module of EC93
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
BBa_K2068019BBa_K2068019 Version 1 (Component)CdiI orphan of EC93
cII p22BBa_R0053 Version 1 (Component)Promoter (p22 cII regulated)
BBa_K2068015BBa_K2068015 Version 1 (Component)CdiA-CT gene from EC93
BBa_J56012BBa_J56012 Version 1 (Component)Invertible sequence of dna includes Ptrc promoter
BBa_K2068016BBa_K2068016 Version 1 (Component)CdiI gene from EC93
pSC101BBa_I50041 Version 1 (Component)pSC101 origin of replication, reverse
BBa_K2068009BBa_K2068009 Version 1 (Component)CdiA-CT gene from o11 of EC869
BBa_K2068011BBa_K2068011 Version 1 (Component)CdiA-CTo1 gene from Enterobacter aerogenes CDI loci 1
CIIBBa_K116602 Version 1 (Component)CII coding region from λ phage
BBa_K2068010BBa_K2068010 Version 1 (Component)CdiI gene from Enterobacter aerogenes CDI loci 1
BBa_K2068014BBa_K2068014 Version 1 (Component)Toxin-immunity orphan module 1 from Enterobacter aerogenes CDI loci 1
CDIBBa_K1650013 Version 1 (Component)This part contains the CDI operon
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
pET fusionBBa_K1122673 Version 1 (Component)Ethanol production module
BBa_P0153BBa_P0153 Version 1 (Component)PoPS -> cII (p22) [S0167]
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
RFP2BBa_I715023 Version 1 (Component)Carboxyl portion of RFP
BBa_K909009BBa_K909009 Version 1 (Component)cDNA of UV-B sensing protein UVR8 from Arabidopsis thaliana
BBa_I714031BBa_I714031 Version 1 (Component)OriT-R (Origin of Transfer for the R751-plasmid nic region)
BBa_K2068012BBa_K2068012 Version 1 (Component)CdiIo1 from Enterobacter aerogenes CDI loci 1
RFP1BBa_I715022 Version 1 (Component)Amino Portion of RFP
BLpBBa_K238013 Version 1 (Component)Exact promoter of the blue light receptor
BBa_K1321002BBa_K1321002 Version 1 (Component)Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25
GFP1BBa_I715019 Version 1 (Component)Amino Half of GFP (aka GFP1)
BBa_M36560BBa_M36560 Version 1 (Component)cDNA of ESR2 Gene
C2HP/RGEBBa_K1442107 Version 1 (Component)C2HP Testing Module (reverse GFP)
ldhE-LcBBa_K1696001 Version 1 (Component)L-Lactate producing module from Lactobacillus casei
BBa_K1321003BBa_K1321003 Version 1 (Component)Re-entry of BBa_K863101, Cellulose Binding Domain CBDcex in rfc25
BBa_K2068013BBa_K2068013 Version 1 (Component)CdiIo2 from Enterobacter aerogenes CDI loci 1
GFP2BBa_I715020 Version 1 (Component)Carboxyl Half of GFP (aka GFP2)
CdoABO_10439 Version 1 (Component)