SynBioHub

Public

BBa_B0034
BBa_B0034 Version 1 (Component)
RBS (Elowitz 1999) -- defines RBS efficiency

Public

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Public

BBa_B0030
BBa_B0030 Version 1 (Component)
RBS.1 (strong) -- modified from R. Weiss

Public

BBa_B0032
BBa_B0032 Version 1 (Component)
RBS.3 (medium) -- derivative of BBa_0030

Public

pBad/araC
BBa_I0500 Version 1 (Component)
Inducible pBad/araC promoter

Public

mRFP1
BBa_E1010 Version 1 (Component)
**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)

Public

BBa_I13453
BBa_I13453 Version 1 (Component)
Pbad promoter

Public

pBAD
BBa_K206000 Version 1 (Component)
pBAD strong

Public

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Public

BBa_B0031
BBa_B0031 Version 1 (Component)
RBS.2 (weak) -- derivative of BBa_0030

Public

BBa_E0430
BBa_E0430 Version 1 (Component)
EYFP (RBS+ LVA- TERM) (B0034.E0030.B0015)

Public

BBa_J44001
BBa_J44001 Version 1 (Component)
Reverse RBS (RBS<sub>rev</sub>) -- corresponds to BBa_B0030

Public

BBa_J04500
BBa_J04500 Version 1 (Component)
IPTG inducible promoter with RBS

Public

BBa_B0033
BBa_B0033 Version 1 (Component)
RBS.4 (weaker) -- derivative of BBa_0030

Public

BBa_E0422
BBa_E0422 Version 1 (Component)
ECFP (RBS+ LVA+ TERM) (B0034.E0022.B0015)

Public

BBa_E0420
BBa_E0420 Version 1 (Component)
ECFP (RBS+ LVA- TERM) (B0034.E0020.B0015)

Public

BBa_K206016
BBa_K206016 Version 1 (Component)
rbs-GFP_LVA-pBAD rev-term (Jammer subpart)

Public

pT7
BBa_K525998 Version 1 (Component)
Promoter T7 and RBS

Public

BBa_I732820
BBa_I732820 Version 1 (Component)
LacI (RBS+, TERM+)

Public

rrnO
rrnO_ter Version (Component)

Public

T7 RBS
BBa_K1362090 Version 1 (Component)
strong T7 RBS

Public

BBa_E0432
BBa_E0432 Version 1 (Component)
EYFP (RBS+ LVA+ TERM) (B0034.E0032.B0015)

Public

BBa_K228000
BBa_K228000 Version 1 (Component)
T7ptag(T7polymerase with amber mutation)

Public

RBS-RFP
BBa_K093005 Version 1 (Component)
RFP with RBS

Public

BBa_C0261
BBa_C0261 Version 1 (Component)
AHL-making Enzyme, luxI (+RBS)

Public

Ara
BBa_K808000 Version 1 (Component)
araC-Pbad - Arabinose inducible regulatory promoter/repressor unit

Public

//rbs
rbs Version 1 (Collection)

Public

BBa_K516022
BBa_K516022 Version 1 (Component)
AiiA protein generator TERM+ RBS+(B0032)

Public

rrnO_ter_seq
rrnO_ter_seq Version (Sequence)

Public

RBS_SpaR
RBS_SpaR Version (Component)

Public

RBS_SpaK
RBS_SpaK Version (Component)

Public

RBS-spoVG
BBa_K143021 Version 1 (Component)
SpoVG ribosome binding site (RBS) for B. subtilis

Public

RBS_SpaR_seq
RBS_SpaR_seq Version (Sequence)

Public

RBS_SpaK_seq
RBS_SpaK_seq Version (Sequence)

Public

Ter
Ter Version (Component)

Public

BBa_I732017
BBa_I732017 Version 1 (Component)
lacZ full-length (RBS+ TERM-)

Public

BBa_K516030
BBa_K516030 Version 1 (Component)
mRFP protein generator TERM+ RBS+(B0030)

Public

BBa_K228009
BBa_K228009 Version 1 (Component)
AraC protein(reversed sequence) and Pbad promoter

Public

RBS_cassette
RBS_cassette Version 1 (Component)
AvrII restriction site (cctagg), overlapped with RBS (aggagga)

Public

BBa_K091225
BBa_K091225 Version 1 (Component)
pBAD RBS LacI

Public

eyfp
BBa_E0031 Version 1 (Component)
EYFP (RBS+ LVA-)

Public

BBa_K165002
BBa_K165002 Version 1 (Component)
Kozak sequence (yeast RBS)

Public

BBa_J44002
BBa_J44002 Version 1 (Component)
pBAD reverse

Public

PBS_F24
PBS_F24 Version 1 (Component)

Public

NLS+Term
BBa_K165018 Version 1 (Component)
SV40 nuclear localization sequence + ADH1 transcription terminator

Public

BBa_I766007
BBa_I766007 Version 1 (Component)
YopH, Rev. MAPK Tyr Phosphatase

Public

BBa_K415000
BBa_K415000 Version 1 (Component)
pLux/cI-OR : RBS-mCherry : Term

Public

BBa_P0455
BBa_P0455 Version 1 (Component)
RBS.Lambda cI LVA+.Term

Public

RBS-rev
BBa_K1616011 Version 1 (Component)
RBS reversed

Public

BBa_K876060
BBa_K876060 Version 1 (Component)
Term-Term-plasR-RBS-CFP-Term-Term

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