Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
//test1test1 Version 1 (Collection) //testtest Version 1 (Collection) His-StopBBa_K133133 Version 1 (Component)His affinity tag-stop
amyE 5 ISBBa_K143001 Version 1 (Component)5??? Integration Sequence for the amyE locus of B. subtilis
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
RGD-His-StBBa_K133036 Version 1 (Component)RGD-His affinity tag-Stop
BBa_K1114300BBa_K1114300 Version 1 (Component)This is the MoClo formatted part of BBa_B0015.
BBa_J29013BBa_J29013 Version 1 (Component)this is test2
BBa_K362005BBa_K362005 Version 1 (Component)sufA , this promoter is controlled by OxyR.
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
BBa_K362001BBa_K362001 Version 1 (Component)ahpC, this promoter is controlled by the OxyR protein.
BBa_J33009BBa_J33009 Version 1 (Component)this is just a test
HisBBa_K157011 Version 1 (Component)His affinity tag; Freiburg standard
BBa_K1114301BBa_K1114301 Version 1 (Component)This is MoClo formatted part of BBa_B0015
ThiEBBa_K558009 Version 1 (Component)Thiamin monophosphate pyrophosphorylase
BBa_K783046BBa_K783046 Version 1 (Component)This is a MoClo converted version of BBa_R0010
BBa_K109584BBa_K109584 Version 1 (Component)this is a test part, disregard it
BBa_J26005BBa_J26005 Version 1 (Component)This is a test part. Ignore it.
BBa_K1218001BBa_K1218001 Version 1 (Component)This is the sacY promoter.
amyE 3 ISBBa_K143002 Version 1 (Component)3??? Integration Sequence for the amyE locus of B. subtilis
BBa_K362002BBa_K362002 Version 1 (Component)dps,this promoter is controlled by OxyR protein
BBa_K737017BBa_K737017 Version 1 (Component)This part conteins gvpC-20psi protein
BBa_J58003BBa_J58003 Version 1 (Component)This is not a part. This is a bomb.
BBa_B0053BBa_B0053 Version 1 (Component)Terminator (His)
BBa_K362003BBa_K362003 Version 1 (Component)oxyR,this promoter is controlled by CRP-cAMP
BBa_K362000BBa_K362000 Version 1 (Component)AcrAB,this promoter is controlled by SoxS protein.
THI3BBa_J45009 Version 1 (Component)ketoisocaproate decarboxylase (THI3); converts alpha-ketoisocaproate to 3-methylbutanal
AckABBa_K737002 Version 1 (Component)This coding is the acetate kinase.
thiSBO_31035 Version 1 (Component) ThiSBO_9243 Version 1 (Component) Zif23BBa_R2000 Version 1 (Component)Promoter, Zif23 regulated, test: between
BBa_K415010BBa_K415010 Version 1 (Component)This is part K415006 with an appended Plux/cI promoter (R0065)
BBa_T1001BBa_T1001 Version 1 (Component)Kill this part
BBa_K2066032BBa_K2066032 Version 1 (Component)whatever this is
BBa_J37037BBa_J37037 Version 1 (Component)This device is to test the Pops Blocker part
BBa_J37038BBa_J37038 Version 1 (Component)This device is to test the Pops Blocker part
His-ScaffoBBa_K1602027 Version 1 (Component)Protein scaffold with N-terminal HisTag
BBa_I717010BBa_I717010 Version 1 (Component)This is a basic composite part
BBa_T1010BBa_T1010 Version 1 (Component)Kill this test
BBa_J52000BBa_J52000 Version 1 (Component)This is the part which robin has created
BBa_K737016BBa_K737016 Version 1 (Component)This part conteins gvpA protein's coding sequence.
aa-tRNABBa_K1722004 Version 1 (Component)This is a kind of aminoacyl-tRNA(aa-tRNA).
BBa_K737003BBa_K737003 Version 1 (Component)This part is polyphosphate kinase.
BBa_K1253114BBa_K1253114 Version 1 (Component)This part is used to test for TetR half-life.