SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_B0031
BBa_B0031 Version 1 (Component)
RBS.2 (weak) -- derivative of BBa_0030

GAL1
BBa_J63006 Version 1 (Component)
yeast GAL1 promoter

BBa_K2066018
BBa_K2066018 Version 1 (Component)
UNS 2 Sequence, from Torella et al., 2013

BBa_K165002
BBa_K165002 Version 1 (Component)
Kozak sequence (yeast RBS)

BBa_K801012
BBa_K801012 Version 1 (Component)
ADH1 yeast terminator

BBa_K1430000
BBa_K1430000 Version 1 (Component)
yeast 2-micron

BBa_J52008
BBa_J52008 Version 1 (Component)
luciferase: luciferin 2-monooxygenase from Renilla reniformis (EC 1.13.12.5; SwissProt:: P27652)

BBa_K165010
BBa_K165010 Version 1 (Component)
ADH1 yeast transcription terminator

pTEF
BBa_K165037 Version 1 (Component)
TEF2 yeast constitutive promoter

BBa_K392003
BBa_K392003 Version 1 (Component)
yeast ADH1 terminator

mCherry
BBa_E2060 Version 1 (Component)
derivative of mRFP1, yeast-optimized

BBa_K530008
BBa_K530008 Version 1 (Component)
TDH3 Yeast Promoter

mRFP1
BBa_E2050 Version 1 (Component)
derivative of mRFP1, yeast-optimized

P0310
BBa_J63005 Version 1 (Component)
yeast ADH1 promoter

yfp
BBa_K165005 Version 1 (Component)
Venus YFP, yeast optimized for fusion

BBa_E2030
BBa_E2030 Version 1 (Component)
enhanced version of EYFP, yeast-optimized

BBa_K530019
BBa_K530019 Version 1 (Component)
HHO1 Yeast UTR

mCherry
BBa_K165004 Version 1 (Component)
mCherry, yeast optimized for fusion

SYFP2
BBa_K864100 Version 1 (Component)
Super Yellow Fluorescent Protein 2 (SYFP2)

BBa_K416003
BBa_K416003 Version 1 (Component)
Yeast Secretion Tag

BBa_K1114107
BBa_K1114107 Version 1 (Component)
Bicistronic Design RBS 2, MoClo Format with BC fusion sites

BBa_K1940000
BBa_K1940000 Version 1 (Component)
anti-microRNA-34c

BBa_K117002
BBa_K117002 Version 1 (Component)
LsrA promoter (indirectly activated by AI-2)

BBa_K1763442
BBa_K1763442 Version 1 (Component)
MaSp1/2[1:2]-12(1C3)

BBa_K1763438
BBa_K1763438 Version 1 (Component)
MaSp1/2[2:1]-12(1C3)

BBa_K530036
BBa_K530036 Version 1 (Component)
pRSBB423 HIS3 2Micron Episomal Yeast Shuttle Vector

BBa_K530039
BBa_K530039 Version 1 (Component)
pRSBB426 URA3 2Micron Episomal Yeast Shuttle Vector

BBa_K530037
BBa_K530037 Version 1 (Component)
pRSBB424 TRP1 2Micron Episomal Yeast Shuttle Vector

BBa_K530038
BBa_K530038 Version 1 (Component)
pRSBB425 LEU2 2Micron Episomal Yeast Shuttle Vector

BBa_K1940009
BBa_K1940009 Version 1 (Component)
microRNA-34c detector 2.0-2-2

BBa_K530014
BBa_K530014 Version 1 (Component)
KRE9 Yeast UTR

BBa_K1486020
BBa_K1486020 Version 1 (Component)
rLuc[2]

BBa_K517005
BBa_K517005 Version 1 (Component)
erg20-2

tFba1
BBa_K1829004 Version 1 (Component)
tFba1: yeast terminator

tEno2
BBa_K1829003 Version 1 (Component)
tEno2: Yeast terminator

BBa_K530005
BBa_K530005 Version 1 (Component)
BAP2 Yeast Promoter

BBa_K530015
BBa_K530015 Version 1 (Component)
FCY2 Yeast Promoter

BBa_I1042
BBa_I1042 Version 1 (Component)
CI(2) "micRNA" asRNA

BBa_K079019
BBa_K079019 Version 1 (Component)
Lac 2 - operator library member

BBa_K517000
BBa_K517000 Version 1 (Component)
GAL galactose-inducible yeast promoter

Kozak & st
BBa_J63003 Version 1 (Component)
designed yeast Kozak sequence

BBa_K801011
BBa_K801011 Version 1 (Component)
TEF1 yeast terminator

BBa_K1763439
BBa_K1763439 Version 1 (Component)
MaSp1/2[2:1]-12(T7)

BBa_K1763443
BBa_K1763443 Version 1 (Component)
MaSp1/2[1:2]-12(T7)

BBa_K801010
BBa_K801010 Version 1 (Component)
TEF2 constitutive yeast promoter

BBa_K517001
BBa_K517001 Version 1 (Component)
GPD constitutive yeast promoter