SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J04450BBa_J04450 Version 1 (Component)RFP Coding Device
BBa_J85600BBa_J85600 Version 1 (Component)attB1 recombination site
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K886001BBa_K886001 Version 1 (Component)Recombination Device composed by lox71-Cre recombinase
CreBBa_J61047 Version 1 (Component)Cre DNA recombinase
lox71BBa_I718017 Version 1 (Component)lox71
PspaSPspaS_core Version (Component) BBa_K886003BBa_K886003 Version 1 (Component)Recombination Device composed by Cre-lox71
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
BBa_I763026BBa_I763026 Version 1 (Component)LacI coding device regulated by pTetR
loxBBa_J61046 Version 1 (Component)[Lox] site for recombination
BBa_K886000BBa_K886000 Version 1 (Component)Fixed lox71
REBBa_J3101 Version 1 (Component)Recombinational Enhancer (RE) for Hin/Hix inverting
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
BBa_F1610BBa_F1610 Version 1 (Component)3OC<sub>6</sub>HSL Sender Device
BBa_F2622BBa_F2622 Version 1 (Component)3OC<sub>6</sub>HSL Receiver Device
pREBBa_K116603 Version 1 (Component)pRE promoter from λ phage
BBa_K886002BBa_K886002 Version 1 (Component)Recombination Device composed by Cre-lox71
Prm +BBa_I12006 Version 1 (Component)Modified lamdba Prm promoter (repressed by 434 cI)
PcarBBa_K861171 Version 1 (Component)Pcar, synthetic promoter repressed by CRP
BBa_T9002BBa_T9002 Version 1 (Component)GFP Producer Controlled by 3OC6HSL Receiver Device
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_I718012BBa_I718012 Version 1 (Component)ptet-lox71-ter
BBa_F2621BBa_F2621 Version 1 (Component)3OC<sub>6</sub>HSL Receiver Device
XreBO_10661 Version 1 (Component) creBBa_K112102 Version 1 (Component)Cre enzyme without start or stop codons
BBa_K112808BBa_K112808 Version 1 (Component)Enterobacteria phage T4 Lysis Device - no promoter
BBa_I0460BBa_I0460 Version 1 (Component)aiiA Device (B0034.C0060.B0015)
BBa_I718009BBa_I718009 Version 1 (Component)pTet-lox71-rbs-gfp-ter
BBa_K750000BBa_K750000 Version 1 (Component)pBADGLT:unstable gfp expression device activated by arabinose
CreABBa_I715000 Version 1 (Component)Amino Half of Cre Recombinase (aka CreA)
CreBBBa_I715001 Version 1 (Component)Carboxl Half of Cre Recombinase (aka CreB)
RS1BBa_K743000 Version 1 (Component)Synechocystis PCC6803 neutral recombination site.
BBa_K313011BBa_K313011 Version 1 (Component)lox2272 site for Cre recombination
CHEBBa_K256023 Version 1 (Component)Cholesteryl Esterase (CHE)
BBa_K313009BBa_K313009 Version 1 (Component)cre recombinase assay device
BBa_I741018BBa_I741018 Version 1 (Component)Right facing promoter (for xylF) controlled by xylR and CRP-cAMP
BBa_K313016BBa_K313016 Version 1 (Component)cre recombinase assay device
RS2BBa_K743001 Version 1 (Component)Synechocystis PCC6803 neutral recombination site.
pLac+GFPBBa_I763004 Version 1 (Component)GFP coding device switched on by IPTG
CRPBBa_J58112 Version 1 (Component)CRP protein
BBa_I718008BBa_I718008 Version 1 (Component)araC-pBad-rbs-cre
CreBBa_I716438 Version 1 (Component){rbs1-A}{GTG.Cre}{b0015 TT}
CWEBBa_K1362433 Version 1 (Component)CWE (extein)
BBa_K1368005BBa_K1368005 Version 1 (Component)pluxR+lox71+luxI