iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Reverse Orientation Sequence Pullreverse_orientation Version 1 (Activity)Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
Codon Optimised Sequence Pullcodon_optimisation Version 1 (Activity)Used to indicate that a sequence was codon optimised after pulling from the source and before submission
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
luxrBBa_C0062 Version 1 (Component)luxR repressor/activator, (no LVA?)
BBa_K2184021BBa_K2184021 Version 1 (Component)SNP for non taster seet taste- TAS1R2 rs35874116
Truncated Sequence PullTruncated Version 1 (Activity)Used to indicate that a sequence was truncated after pulling from the source and before submission
BBa_K2184033BBa_K2184033 Version 1 (Component)SNP for non-taster coffee bitterness taste- TAS2R3 RS765007
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
BBa_K2184006BBa_K2184006 Version 1 (Component)SNP rs35874116 for sweet taste
BBa_K2184027BBa_K2184027 Version 1 (Component)SNP for non-taster coffee bitterness taste- TAS2R5 RS2227264
BBa_K2184025BBa_K2184025 Version 1 (Component)SNP for non-taster coffee bitterness taste- TAS2R4 RS2234001
BBa_K2184026BBa_K2184026 Version 1 (Component)SNP for non-taster coffee bitterness taste- TAS2R5 RS2234012
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
BBa_K2184023BBa_K2184023 Version 1 (Component)SNP for non taster SNP taste- TAS2R38 rs1726866
FurBO_11498 Version 1 (Component) BBa_K2184034BBa_K2184034 Version 1 (Component)SNP for non-taster NaCl &Sour- TAS1R1 rs34160967
BBa_K2184035BBa_K2184035 Version 1 (Component)SNP for non-taster umami & monosodium gluten - TAS1R3 rs307377
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_K2184037BBa_K2184037 Version 1 (Component)mutant SNP for non taster NaCl & Sour taste and guidRNA
BBa_K2184036BBa_K2184036 Version 1 (Component)mutant SNP for non taster coffee bitterness taste and guidRNA
BBa_K2184038BBa_K2184038 Version 1 (Component)mutant SNP for non taster Umami & Monosodium gluten taste with guidRNA
BBa_K2184030BBa_K2184030 Version 1 (Component)SNP for non-taster umami & monosodium gluten -TAS1R3 rs76755863
BBa_K2184008BBa_K2184008 Version 1 (Component)SNP for NaCl & Sour taste- TAS1R1 rs17492553
BBa_K2184013BBa_K2184013 Version 1 (Component)TAS1R3 rs76755863- umami& monosodium gluten SNP taste
BBa_K2184018BBa_K2184018 Version 1 (Component)TAS1R3 rs307377- Umami &Monosodium gluten SNP taste
BBa_K2184012BBa_K2184012 Version 1 (Component)TAS2R3 RS765007- Coffe bitterness SNP taste
BBa_K2184019BBa_K2184019 Version 1 (Component)TAS2R4 RS2234001- Coffee bitterness SNP taste
BBa_K2184014BBa_K2184014 Version 1 (Component)TAS2R5 RS2234012-Coffee bitterness SNP taste
BBa_K2184015BBa_K2184015 Version 1 (Component)TAS2R5 RS2227264-Coffee bitterness SNP taste
BBa_K2184024BBa_K2184024 Version 1 (Component)SNP for non-tastePTC taste TAS2R38 rs10246939
BBa_K2184031BBa_K2184031 Version 1 (Component)mutant SNP for non taster grapefruit juice bitterness flavor
BBa_K2184028BBa_K2184028 Version 1 (Component)SNP for non-taster cilantro preference - OR10A2 rs72921001
BBa_K2184032BBa_K2184032 Version 1 (Component)SNP for non-taster grapefruit juice bitterness+ gRNA
BBa_K2184005BBa_K2184005 Version 1 (Component)SNP for PTC taste - TAS2R38 rs713598
BBa_K2184022BBa_K2184022 Version 1 (Component)Consuming alcoholic SNP-non taster- TAS2R16 rs846672
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
BBa_K2184011BBa_K2184011 Version 1 (Component)TAS2R38 rs10246939-PTC SNP taste
BBa_K2184009BBa_K2184009 Version 1 (Component)Consuming Alcoholic SNP taste- TAS2R16 rs846672
BBa_K2184016BBa_K2184016 Version 1 (Component)OR10A2 rs72921001-cilantro prefeerence SNP taste
BBa_K2184020BBa_K2184020 Version 1 (Component)Non taster PTC - TAS2R38 rs713598
lasIBBa_C0178 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa (no LVA)