iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Amp CasBBa_I13800 Version 1 (Component)Ampicillin Resistance Cassette
GFP reportBBa_E0240 Version 1 (Component)GFP generator
GFP generaBBa_E0840 Version 1 (Component)GFP generator
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
PspaSPspaS_core Version (Component) LuxRBBa_I0462 Version 1 (Component)luxR Protein Generator
BBa_K359001BBa_K359001 Version 1 (Component)AIP sensor and generator with FepA pore
BBa_I746200BBa_I746200 Version 1 (Component)FepA L8T Mutant - Large Diffusion pore for E. coli outer membrane.
BBa_K359007BBa_K359007 Version 1 (Component)AIP sensor with FepA pore
BBa_J13002BBa_J13002 Version 1 (Component)TetR repressed POPS/RIPS generator
BBa_I746100BBa_I746100 Version 1 (Component)AIP sensor infrastructure (agrC + agrA from S. aureus with RBSes)
BBa_I746000BBa_I746000 Version 1 (Component)AIP generator (agrB + agrD with RBSes)
BBa_K081014BBa_K081014 Version 1 (Component)RFP protein generator - PoPS->RFP
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
pREBBa_K116603 Version 1 (Component)pRE promoter from λ phage
BBa_K359009BBa_K359009 Version 1 (Component)AIP sensor and consequent RFP reporter; contains FepA permeability pore
BBa_K359002BBa_K359002 Version 1 (Component)Agr quroum sensing sensor/generator, FepA pore, with P2 + reporter
BBa_K359006BBa_K359006 Version 1 (Component)AIP sensor and generator
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
BBa_K1045010BBa_K1045010 Version 1 (Component)RBS BBa_B0034 with inversed Pre- and Suffix
BBa_K592016BBa_K592016 Version 1 (Component)B0034-YF1-B0034-FixJ, blue light sensor and RR with RBS
BBa_I746101BBa_I746101 Version 1 (Component)I746100 (AIP sensor infrastructure - agrC + agrA with RBSes) + B0015 (Terminator)
BBa_I746001BBa_I746001 Version 1 (Component)I746000 (AIP generator - agrB + agrD with RBSes) + B0015 (Terminator)
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
BBa_K359000BBa_K359000 Version 1 (Component)AIP sensor and generator
BBa_I746009BBa_I746009 Version 1 (Component)AIP generator + outer membrane permeability
BBa_F1610BBa_F1610 Version 1 (Component)3OC<sub>6</sub>HSL Sender Device
BBa_K228000BBa_K228000 Version 1 (Component)T7ptag(T7polymerase with amber mutation)
BBa_K322124BBa_K322124 Version 1 (Component)Red light sensor Cph8 (from Coliroid) with RBS
RBS-RFPBBa_K093005 Version 1 (Component)RFP with RBS
BBa_K359008BBa_K359008 Version 1 (Component)AIP generator and sensor, with an added RFP reporter
BBa_K2066527BBa_K2066527 Version 1 (Component)B0034 with scar TACTAG
BBa_I0466BBa_I0466 Version 1 (Component)RhlR Protein Generator
AARBBa_K590032 Version 1 (Component)Acyl-ACP Reductase (AAR) - Synechococcus elongatus PCC7942
BBa_I746107BBa_I746107 Version 1 (Component)I746101 (AIP sensor infrastructure) + I746105 (Inducible P2 + GFP reporter)
YF1BBa_K592004 Version 1 (Component)YF1 blue-light sensor protein
BBa_K204047BBa_K204047 Version 1 (Component)AI-1 generator
BBa_K1051006BBa_K1051006 Version 1 (Component)Saccharomycescerevisiae TBY-1 terminator with stopcodon
BBa_I746103BBa_I746103 Version 1 (Component)I746101 (AIP sensor infrastructure - agrC + agrA with RBSes + Terminator) + I746104 (Inducible P2)
BBa_K814001BBa_K814001 Version 1 (Component)ATP-grasp (ATPG) generator