iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0034BBa_B0034 Version 1 (Component)RBS (Elowitz 1999) -- defines RBS efficiency
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
BBa_B0030BBa_B0030 Version 1 (Component)RBS.1 (strong) -- modified from R. Weiss
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
BBa_K953002BBa_K953002 Version 1 (Component)Agrobacterium tumefaciens Bacteriophytochrome with RBS (E. coli Codon Optimised)
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
PBS_F24PBS_F24 Version 1 (Component) BBa_K497011BBa_K497011 Version 1 (Component)Agrobacterium tumefaciens bacteriophytochrome fwd primer with RBS insertion
BBa_K497010BBa_K497010 Version 1 (Component)Agrobacterium tumefaciens bacteriophytochrome fwd primer
pT7BBa_K525998 Version 1 (Component)Promoter T7 and RBS
RBS-RFPBBa_K093005 Version 1 (Component)RFP with RBS
BBa_K497016BBa_K497016 Version 1 (Component)Agrobacterium tumefaciens fwd primer for bacteriophytochrome for insertion after heme oxygenase
BBa_K497012BBa_K497012 Version 1 (Component)Agrobacterium tumefaciens bacteriophytochrome rvs primer
BBa_K497009BBa_K497009 Version 1 (Component)Agrobacterium tumefaciens bacteriophytochrome with RBS
T7 RBSBBa_K1362090 Version 1 (Component)strong T7 RBS
AT-BphBBa_K646001 Version 1 (Component)Agrobacterium tumefaciens Bacteriophotochrome (Rhizobium radiobacter)
BBa_K497008BBa_K497008 Version 1 (Component)Agrobacterium tumefaciens bacteriophytochrome
BBa_K497004BBa_K497004 Version 1 (Component)Agrobacterium tumefaciens bacteriophytochrome & RBS & 3
BBa_K497002BBa_K497002 Version 1 (Component)Agrobacterium tumefaciens bacteriophytochrome with 3
BBa_C0261BBa_C0261 Version 1 (Component)AHL-making Enzyme, luxI (+RBS)
BBa_K953003BBa_K953003 Version 1 (Component)Agrobacterium tumefaciens Bacteriophytochrome with T7 & RBS (E. coli Codon Optimised)
BBa_K497017BBa_K497017 Version 1 (Component)Reverse primer for Agrobacterium tumefaciens bacteriophytochrome gene for insertion after heme oxyge
RBS_cassetteRBS_cassette Version 1 (Component)AvrII restriction site (cctagg), overlapped with RBS (aggagga)
BBa_K497014BBa_K497014 Version 1 (Component)Deinococcus radiodurans bacteriophytochrome fwd primer with RBS
BBa_K497006BBa_K497006 Version 1 (Component)Synechocystis heme oxygenase 1 with Agrobacterium tumefaciens bacteriophytochrome & RBS
//rbsrbs Version 1 (Collection) mCherryBBa_J06702 Version 1 (Component)mCherry, bacterial with RBS and forward terminator
RBS-spoVGBBa_K143021 Version 1 (Component)SpoVG ribosome binding site (RBS) for B. subtilis
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
VF2BBa_G00100 Version 1 (Component)Forward primer for sequencing/amplifying BioBrick parts (VF2)
BBa_I13457BBa_I13457 Version 1 (Component)Improved insertion site with two RNAse E cut sites
BBa_J44001BBa_J44001 Version 1 (Component)Reverse RBS (RBS<sub>rev</sub>) -- corresponds to BBa_B0030
BBa_K497013BBa_K497013 Version 1 (Component)Deinococcus radiodurans bacteriophytochrome fwd primer
BBa_K646008BBa_K646008 Version 1 (Component)T7 promoter with Heme oxygenase and Agrobacterium tumefaciens bacteriophytochrome
BBa_E0430BBa_E0430 Version 1 (Component)EYFP (RBS+ LVA- TERM) (B0034.E0030.B0015)
BBa_K953007BBa_K953007 Version 1 (Component)Agrobacterium tumefaciens Bacteriophytochrome with T7 + Heme Oxygenase (E. coli Codon Optimised)
BBa_K953005BBa_K953005 Version 1 (Component)Heme Oxygenase with T7 + Agrobacterium tumefaciens Bacteriophytochrome (E. coli Codon Optimised)