Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_C0261BBa_C0261 Version 1 (Component)AHL-making Enzyme, luxI (+RBS)
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
BBa_K1437002BBa_K1437002 Version 1 (Component)AhR receptor in mouse.
BLpBBa_K238013 Version 1 (Component)Exact promoter of the blue light receptor
BBa_K777000BBa_K777000 Version 1 (Component)Tar receptor
AARBBa_K590032 Version 1 (Component)Acyl-ACP Reductase (AAR) - Synechococcus elongatus PCC7942
BBa_I746104BBa_I746104 Version 1 (Component)P2 promoter in agr operon from S. aureus
tar-envZBBa_C0082 Version 1 (Component)Receptor, tar-envZ
BBa_K209399BBa_K209399 Version 1 (Component)AarI A-D acceptor vector
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
BBa_K228004BBa_K228004 Version 1 (Component)NahR( reverse) - salicylate promoter
BBa_K404111BBa_K404111 Version 1 (Component)Mouse guanylate kinase (mGMK)
BBa_K1973033BBa_K1973033 Version 1 (Component)nahR-Psal (inducible promoter)
BBa_K1321002BBa_K1321002 Version 1 (Component)Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25
BBa_K1051000BBa_K1051000 Version 1 (Component)Stop codon free RFP in RFC[23] standard
BBa_K1159303BBa_K1159303 Version 1 (Component)Signal Peptide of SERK Receptor from <i>Physcomitrella patens</i> in RFC[25]
BBa_K575004BBa_K575004 Version 1 (Component)Continuous expression of LasR receptor protein (with RBS, B0030)
BBa_K1321003BBa_K1321003 Version 1 (Component)Re-entry of BBa_K863101, Cellulose Binding Domain CBDcex in rfc25
BBa_K1437005BBa_K1437005 Version 1 (Component)mouse AhR detective protein 83-805 without terminator codon
BBa_K1633005BBa_K1633005 Version 1 (Component)MOR siRNA-3 (siRNA for mouse Mu opioid receptor)
BBa_K1633004BBa_K1633004 Version 1 (Component)MOR siRNA-2 (siRNA for mouse Mu opioid receptor)
BBa_K1633003BBa_K1633003 Version 1 (Component)MOR siRNA-1 (siRNA for mouse Mu opioid receptor)
BBa_K1633006BBa_K1633006 Version 1 (Component)MOR siRNA-4 (siRNA for mouse Mu opioid receptor)
BBa_K572009BBa_K572009 Version 1 (Component)Mouse Beta Carotene Dioxygenase
BBa_J37019BBa_J37019 Version 1 (Component)AHL induced LuxR generator
BBa_K216003BBa_K216003 Version 1 (Component)TNT receptor TNT-R3
virABBa_K389010 Version 1 (Component)VirA receptor (expressed)
BBa_K1437008BBa_K1437008 Version 1 (Component)mouse AhR detective protein 521-805 without terminator codon optimized for yeast
BBa_K1437007BBa_K1437007 Version 1 (Component)mouse AhR detective protein 521-805 with terminator codon optimized for yeast
BBa_K1321337BBa_K1321337 Version 1 (Component)sfGFP in Freiburg format (RFC 25)
BBa_K176028BBa_K176028 Version 1 (Component)TetR repressible AHL->PoPS Receiver (Very High LuxR): pCon 0.70->luxR+pLux/Tet->PoPS
Mouse TSHBBa_T9501 Version 1 (Component)Mouse TSH
BBa_M45444BBa_M45444 Version 1 (Component)Mouse fibronectin promoter
BBa_K1690004BBa_K1690004 Version 1 (Component)Pheromone receptor (C. albicans)
BBa_K1690005BBa_K1690005 Version 1 (Component)Pheromone receptor (C. parapsilosis)
BBa_K1434000BBa_K1434000 Version 1 (Component)cAMP receptor protein (CRP) mutant
BBa_K1973005BBa_K1973005 Version 1 (Component)nahR-Psal-nasF
BBa_K575007BBa_K575007 Version 1 (Component)Continous expression of RhlR receptor protein (with RBS, B0034)
virABBa_K389001 Version 1 (Component)VirA receptor
BBa_M45446BBa_M45446 Version 1 (Component)Mouse fibronectin promoter
BBa_K2170051BBa_K2170051 Version 1 (Component)Secretory prokaryotic biotin presenting receptor with biotin acceptor peptide