HYGHygromicin_Resistance Version 1 (Unknown)Organism: Cryptococcus neoformans serotype A strain H99O
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
BBa_B0012BBa_B0012 Version 1 (Component)TE from coliphageT7
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
Scar 25BBa_B0105 Version 1 (Component)RFC 25 Scar Sequence
BBa_J04450BBa_J04450 Version 1 (Component)RFP Coding Device
Amp CasBBa_I13800 Version 1 (Component)Ampicillin Resistance Cassette
Scar25 ATGBBa_K1319106 Version 1 (Component)RFC 25 Translation Start Scar Sequence
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
RFC 37BBa_K245009 Version 1 (Component)RFC 37 Scar Sequence
BBa_K1159100BBa_K1159100 Version 1 (Component)Autolysis resistant TEV Protease S219V mutant in RFC[25]
BBa_K1321005BBa_K1321005 Version 1 (Component)Synthetic Phytochelatin EC(20) RFC[25]
BBa_K1159101BBa_K1159101 Version 1 (Component)N-terminal half of TEV Protease S219V mutant (for Split-TEV-Protease applications) in RFC[25]
BBa_K1321337BBa_K1321337 Version 1 (Component)sfGFP in Freiburg format (RFC 25)
BBa_K1159102BBa_K1159102 Version 1 (Component)C-terminal half of TEV Protease S219V mutant (for Split-TEV-Protease applications) in RFC[25]
BBa_K1051000BBa_K1051000 Version 1 (Component)Stop codon free RFP in RFC[23] standard
TEVBBa_K316012 Version 1 (Component)TEV protease S219P autocatalysis resistant variant
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
BBa_K1321339BBa_K1321339 Version 1 (Component)CBDcenA+Linker, RFC 25 standard
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
BBa_K1321009BBa_K1321009 Version 1 (Component)Nickel Binding Protein (NiBP) Freiburg format (RFC[25])
rrnOrrnO_ter Version (Component) BBa_K1321011BBa_K1321011 Version 1 (Component)SmtA metallothionein in Freiburg format (RFC[25])
tetA(C)fBBa_J31007 Version 1 (Component)tetracycline resistance protein TetA(C) (forward), [cf. BBa_J31006]
BBa_K1319004BBa_K1319004 Version 1 (Component)TEV protease with anti-self cleavage mutation S219V, codon optimized for E. coli
BBa_K1321012BBa_K1321012 Version 1 (Component)fMT metallothionein in Freiburg format (RFC[25])
BBa_K1321342BBa_K1321342 Version 1 (Component)sfGFP fused to CBDcex in RFC 25
BBa_K1321341BBa_K1321341 Version 1 (Component)sfGFP fused to CBDclos in RFC 25
BBa_K1159001BBa_K1159001 Version 1 (Component)NanoLuc Luciferase in RFC[25]
RBS-RFPBBa_K093005 Version 1 (Component)RFP with RBS
BBa_K1321349BBa_K1321349 Version 1 (Component)CBDcex fused to sfGFP in RFC 25
BBa_K648008BBa_K648008 Version 1 (Component)TEV protease cleaveage site with Standard 25 Prefix/Suffix
BBa_K1321343BBa_K1321343 Version 1 (Component)NiBP fused to CBDclos in RFC 25
BBa_K1321344BBa_K1321344 Version 1 (Component)NiBP fused to CBDcex in RFC 25
BBa_K200028BBa_K200028 Version 1 (Component)Protease resistant PAH
BBa_K1639008BBa_K1639008 Version 1 (Component)Tev Protease, single S219V mutation in the internal cleavage site
TerTer Version (Component) BBa_K1321346BBa_K1321346 Version 1 (Component)CBDclos fused to sfGFP in RFC 25
BBa_K1159112BBa_K1159112 Version 1 (Component)FRET Reporter for TEV Protease activity (eCFP_TEV-site-linker_SYFP2) in RFC[25]
BBa_J44001BBa_J44001 Version 1 (Component)Reverse RBS (RBS<sub>rev</sub>) -- corresponds to BBa_B0030
BBa_K1159106BBa_K1159106 Version 1 (Component)PhyB(2-908 AA)_36AALinker_C-TEV-Protease (First part for a light-switchable TEV-Protease) in RFC[25]