Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

ACS Synbio Generation
ACS_Synbio_Generation Version 1 (Activity)
Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project

iGEM to SBOL conversion
igem2sbol Version 1 (Activity)
Conversion of the iGEM parts registry to SBOL2.1

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

GFP
BBa_E0040 Version 1 (Component)
green fluorescent protein derived from jellyfish Aequeora victoria wild-type GFP (SwissProt: P42212

Composite Sequence Pull
Composite Version 1 (Activity)
When multiple sources where combined to make a new part.

mRFP1
BBa_E1010 Version 1 (Component)
**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)

Lock 1
BBa_J01010 Version 1 (Component)
Riboregulator Lock 1

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

eyfp
BBa_E0030 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

BBa_J70010
BBa_J70010 Version 1 (Component)
A BioScaffold Part (Uses PpiI), for offset see Part Design page

YFP
BBa_E0032 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

BBa_J70012
BBa_J70012 Version 1 (Component)
A BioScaffold Part (Uses PsrI), Protein Head Remover see Part Design page

ecfp
BBa_E0020 Version 1 (Component)
engineered cyan fluorescent protein derived from A. victoria GFP

BBa_J70030
BBa_J70030 Version 1 (Component)
A BioScaffold Part (Uses PpiI), Protein Tail Remover see Part Design Page

BBa_J70015
BBa_J70015 Version 1 (Component)
PpiI and PsrI LASR Left Testing Part

BBa_J70040
BBa_J70040 Version 1 (Component)
A BioScaffold Part (Uses AarI, MabI) for Library Vector Preparation (see Part Design page)

BBa_J70011
BBa_J70011 Version 1 (Component)
LASR3 (actually LASR1)

BBa_J70016
BBa_J70016 Version 1 (Component)
PpiI Right Testing Part

BBa_J70019
BBa_J70019 Version 1 (Component)
PsrI Right Testing Part for LASR parts

BBa_J70510
BBa_J70510 Version 1 (Component)
Mesoplasma florum origin of replication

BBa_J70050
BBa_J70050 Version 1 (Component)
Left Library Insert Preparation Part (To use with J70052, and J70040)

BBa_J07014
BBa_J07014 Version 1 (Component)
scFv anti-fluorescein [4M5.3]

BBa_J07012
BBa_J07012 Version 1 (Component)
scFv anti-fluorescein [4-4-20]

ECFP
BBa_E0022 Version 1 (Component)
enhanced cyan fluorescent protein derived from A. victoria GFP

BBa_J07013
BBa_J07013 Version 1 (Component)
scFv anti-fluorescein [S101A]

BBa_J70310
BBa_J70310 Version 1 (Component)
Mesoplasma florum pBG7AU plasmid origin

BBa_J07018
BBa_J07018 Version 1 (Component)
FecA'

BBa_J07019
BBa_J07019 Version 1 (Component)
FecA Promoter (with Fur box)

BBa_J70000
BBa_J70000 Version 1 (Component)
sbpa (a protein that forms crystals in the presence of calcium)

BBa_J70060
BBa_J70060 Version 1 (Component)
BBa_J70010 (PpiI) protein fusion test part

BBa_J07010
BBa_J07010 Version 1 (Component)
ToxR_inner (aa's 1-198; cytoplasm + TM)

BBa_J70014
BBa_J70014 Version 1 (Component)
LASR PsrI type insert

BBa_J70210
BBa_J70210 Version 1 (Component)
A BioScaffold Part (Uses PpiI), similar to J70010 see Part Design Page

BBa_J70013
BBa_J70013 Version 1 (Component)
LASR PpiI type insert

BBa_J70001
BBa_J70001 Version 1 (Component)
sbpa (a protein that forms crystals in the presence of calcium)

BBa_J07011
BBa_J07011 Version 1 (Component)
ToxR promoter (ctx) controlling GFP