SynBioHub

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SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

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eyfp
BBa_E0030 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

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ecfp
BBa_E0020 Version 1 (Component)
engineered cyan fluorescent protein derived from A. victoria GFP

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YFP
BBa_E0032 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

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GFP report
BBa_E0240 Version 1 (Component)
GFP generator

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ECFP
BBa_E0022 Version 1 (Component)
enhanced cyan fluorescent protein derived from A. victoria GFP

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EYFP
BBa_E0034 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

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eyfp
BBa_E0031 Version 1 (Component)
EYFP (RBS+ LVA-)

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BBa_E0430
BBa_E0430 Version 1 (Component)
EYFP (RBS+ LVA- TERM) (B0034.E0030.B0015)

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BBa_I765009
BBa_I765009 Version 1 (Component)
ExbB iron channel - EYFP reporter

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ecfp
BBa_E0021 Version 1 (Component)
ECFP (RBS+ LVA-)

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BBa_I765008
BBa_I765008 Version 1 (Component)
TonB Iron channel - EYFP reporter

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BBa_I765006
BBa_I765006 Version 1 (Component)
ExbB iron channel, LuxR resiver device

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BBa_K775004
BBa_K775004 Version 1 (Component)
GPCR reporter FUS1-EGFP

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ExbB
BBa_I765002 Version 1 (Component)
ExbB membrane spanning protein in TonB-ExbB-ExbD complex [ Escherichia coli K12 ]

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BBa_I13401
BBa_I13401 Version 1 (Component)
GFP reporter for RHS of library test constructs

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YFP
BBa_K592101 Version 1 (Component)
Yellow Fluorescent Protein (YFP)

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EYFP
BBa_E0036 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

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BBa_K1357010
BBa_K1357010 Version 1 (Component)
eRFP reporter

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BBa_E0422
BBa_E0422 Version 1 (Component)
ECFP (RBS+ LVA+ TERM) (B0034.E0022.B0015)

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BBa_E0420
BBa_E0420 Version 1 (Component)
ECFP (RBS+ LVA- TERM) (B0034.E0020.B0015)

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ECFP
BBa_E0024 Version 1 (Component)
enhanced cyan fluorescent protein derived from A. victoria GFP

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BBa_E0432
BBa_E0432 Version 1 (Component)
EYFP (RBS+ LVA+ TERM) (B0034.E0032.B0015)

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BBa_K209402
BBa_K209402 Version 1 (Component)
AarI A-B part, signal sequence-FLAG-YFP [SSFYFP]

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yfp
BBa_K165005 Version 1 (Component)
Venus YFP, yeast optimized for fusion

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BBa_I765010
BBa_I765010 Version 1 (Component)
Iron promoter -EYFP reporter

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ecfp
BBa_I15017 Version 1 (Component)
B0032.EYFP

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//primer/reporter/yfp
primer_reporter_yfp Version 1 (Collection)

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BBa_J61002
BBa_J61002 Version 1 (Component)
EX-Ptet-S-rbsRFP-P "RFP reporter"

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ecfp
BBa_I15016 Version 1 (Component)
B0032.ECFP

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BBa_K2100005
BBa_K2100005 Version 1 (Component)
pENTR eYFP

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BBa_K1114208
BBa_K1114208 Version 1 (Component)
E0030_CD, YFP Reporter

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ECFP
BBa_E0026 Version 1 (Component)
enhanced cyan fluorescent protein derived from A. victoria GFP

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BBa_J95001
BBa_J95001 Version 1 (Component)
Renilla Reniformis luciferase reporter

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BBa_E2030
BBa_E2030 Version 1 (Component)
enhanced version of EYFP, yeast-optimized

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BBa_K160000
BBa_K160000 Version 1 (Component)
Cl Channel

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BBa_M36042
BBa_M36042 Version 1 (Component)
EfeU elemental iron (II) transporter

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BBa_I15018
BBa_I15018 Version 1 (Component)
polycistronic ECFP+EYFP under B0031

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BBa_I15015
BBa_I15015 Version 1 (Component)
polycistronic ECFP+EYFP under B0032

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//function/metalsensing/iron
function_metalsensing_iron Version 1 (Collection)

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BBa_K249006
BBa_K249006 Version 1 (Component)
Fusion EYFP with C-terminal Arginine Tag

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//cds/reporter/yfp
cds_reporter_yfp Version 1 (Collection)

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BBa_K542005
BBa_K542005 Version 1 (Component)
pTet Regulated Arg-tagged ECFP and EYFP (FRET Reporter)

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//promoter/iron
promoter_iron Version 1 (Collection)

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BBa_K909005
BBa_K909005 Version 1 (Component)
cI protein with EYFP as a reporter

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eYFP-GOI
BBa_K678010 Version 1 (Component)
eYFP-GOI

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//cds/membrane/channel
cds_membrane_channel Version 1 (Collection)

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BBa_K1151004
BBa_K1151004 Version 1 (Component)
pexbB

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BBa_J69513
BBa_J69513 Version 1 (Component)
EYFP Reporter

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BBa_J69514
BBa_J69514 Version 1 (Component)
EYFP Reporter

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