GAL7GenBank_CP003831_Region_178967_179986 Version 1 (Unknown)Organism: Cryptococcus neoformans var. grubii H99
GAL7GenBank_AE017353_Region_190704_1911746 Version 1 (Unknown)Organism: Cryptococcus neoformans var. neoformans JEC21
GAL1GenBank_CP003831_Region_176110_177085 Version 1 (Unknown)Organism: Cryptococcus neoformans var. grubii H99
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Reverse Orientation Sequence Pullreverse_orientation Version 1 (Activity)Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
Codon Optimised Sequence Pullcodon_optimisation Version 1 (Activity)Used to indicate that a sequence was codon optimised after pulling from the source and before submission
Amp CasBBa_I13800 Version 1 (Component)Ampicillin Resistance Cassette
GAL1BBa_J63006 Version 1 (Component)yeast GAL1 promoter
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Truncated Sequence PullTruncated Version 1 (Activity)Used to indicate that a sequence was truncated after pulling from the source and before submission
BBa_K2066018BBa_K2066018 Version 1 (Component)UNS 2 Sequence, from Torella et al., 2013
BBa_K511003BBa_K511003 Version 1 (Component)UAS-Gal4 Promoter MammoBlock
BBa_K2066019BBa_K2066019 Version 1 (Component)UNS 3 Sequence, from Torella et al., 2013
Gal4DBBBa_J176020 Version 1 (Component)Gal4 DB
Las CIOBBa_I14016 Version 1 (Component)P(Las) CIO
Gal4-UASBBa_K1884004 Version 1 (Component)Upstream activating sequence
BBa_K809601BBa_K809601 Version 1 (Component)GAL promoter (kozak) without start codon ATG
BBa_K737033BBa_K737033 Version 1 (Component)galK is the leader sequence of galactokinase (GalK)
BBa_K105024BBa_K105024 Version 1 (Component)Gal4 - operator
GC Optimised Sequence PullGC_Optimised Version 1 (Activity)Used to indicate that a sequence was GC optimised after pulling from the source and before submission
las TetOBBa_I14015 Version 1 (Component)P(Las) TetO
BBa_K758002BBa_K758002 Version 1 (Component)GAL4, this protein binds the UAS
BBa_K861150BBa_K861150 Version 1 (Component)GalF, putative regulatory subunit for GalU
BBa_K511825BBa_K511825 Version 1 (Component)Inducible Notch-Gal4-ESN Receptor Generator (UAS-Gal4-Notch-Gal4-ESN) MammoBlock Device
BBa_K1144006BBa_K1144006 Version 1 (Component)GAL4 (3UAS) activation reporter
BBa_K1144007BBa_K1144007 Version 1 (Component)GAL4 (6UAS) activation reporter
BBa_K1144008BBa_K1144008 Version 1 (Component)GAL4 (9UAS) activation reporter
GalUBBa_K901004 Version 1 (Component)GalU from <i>Eschericia coli</i>
BBa_K2100020BBa_K2100020 Version 1 (Component)pENTR GAL4-VP16
galKBO_32577 Version 1 (Component) fusionBBa_I12200 Version 1 (Component)Lambda cI - Gal4 fusion protein
BBa_K511914BBa_K511914 Version 1 (Component)Inducible rtTA3 Transactivator Generator (UAS-Gal4-rtTA3) MammoBlock Device
BBa_K511912BBa_K511912 Version 1 (Component)Inducible LacI Repressor Generator (UAS-Gal4-LacI) MammoBlock Device
BBa_K511207BBa_K511207 Version 1 (Component)Gal4-VP16 Transactivator MammoBlock
UAS-LacZBBa_K758005 Version 1 (Component)UAS LacZ, this part expresses LacZ in the presence of GAL4
BBa_K758004BBa_K758004 Version 1 (Component)GAL4, this part coding protein binds and activates the UAS sequence
BBa_K105007BBa_K105007 Version 1 (Component)Gal4 - DNA binding domain
BBa_K511819BBa_K511819 Version 1 (Component)Inducible Yellow Fluorescent Protein Generator (UAS-Gal4-Citrine) MammoBlock Device
BBa_K511821BBa_K511821 Version 1 (Component)Inducible Fluorescence/Repression Generator (UAS-Gal4-amCyan-miRFF4) MammoBlock Device
BBa_K511820BBa_K511820 Version 1 (Component)Inducible Blue Fluorescent Protein Generator (UAS-Gal4-EBFP2) MammoBlock Device
BBa_K511823BBa_K511823 Version 1 (Component)Inducible Red Fluorescent Protein Generator (UAS-Gal4-mKate) MammoBlock Device