Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K1906002BBa_K1906002 Version 1 (Component)LtrB Group II intron tail part
BBa_K1906001BBa_K1906001 Version 1 (Component)LtrB Group II intron Front Segment
const.BBa_R1075 Version 1 (Component)Constitutive Promoter II
BBa_K209402BBa_K209402 Version 1 (Component)AarI A-B part, signal sequence-FLAG-YFP [SSFYFP]
IntronBBa_J176014 Version 1 (Component)Intron
BBa_J70594BBa_J70594 Version 1 (Component)RFC12 TAATAA Tail Domain
BBa_M36042BBa_M36042 Version 1 (Component)EfeU elemental iron (II) transporter
MtrBBO_10858 Version 1 (Component) BBa_J70030BBa_J70030 Version 1 (Component)A BioScaffold Part (Uses PpiI), Protein Tail Remover see Part Design Page
cI857BBa_J06503 Version 1 (Component)Lambda cI857 (Lambda II) (RBS- LVA+)
BBa_K209400BBa_K209400 Version 1 (Component)AarI B-C part, hM4D
LtrABBa_K1906003 Version 1 (Component)Intron encoded protein LtrA
TALBBa_K1033000 Version 1 (Component)Tyrosine ammonia-lyase (TAL) with RBS
InteinBBa_K300004 Version 1 (Component)Engineered pH-inducible intein (codon optimized for E. coli) - internal domain
BBa_K747095BBa_K747095 Version 1 (Component)TAL-Protein_TT6_Direpeat
BBa_K747094BBa_K747094 Version 1 (Component)TAL-Protein_TG6_Direpeat
BBa_S03119BBa_S03119 Version 1 (Component)--Specify Parts List--
BBa_M31951BBa_M31951 Version 1 (Component)part of Gene II of M13K07
mtrBBBa_K098989 Version 1 (Component)mtrB coding region
BBa_K157012BBa_K157012 Version 1 (Component)Strep affinity tag II; Freiburg standard
BBa_K209415BBa_K209415 Version 1 (Component)AarI B-C part, hM2D
BBa_K737017BBa_K737017 Version 1 (Component)This part conteins gvpC-20psi protein
BBa_J70042BBa_J70042 Version 1 (Component)6his part for use with BioScaffold parts ATG-6his-GGATCC (glycine serine)
BBa_M36726BBa_M36726 Version 1 (Component)Type II Signal Peptide
BBa_K1799006BBa_K1799006 Version 1 (Component)LsrB (wild type)
BBa_K1799010BBa_K1799010 Version 1 (Component)LsrB (modularization optimized)
InteinBBa_K1483003 Version 1 (Component)Ssp GyrB Split Intein
BBa_K223043BBa_K223043 Version 1 (Component)RALDH II gene: Converts retinal into retinoic acid
InteinBBa_K1947002 Version 1 (Component)Intein
BBa_T1001BBa_T1001 Version 1 (Component)Kill this part
EnvZ TailBBa_K1909005 Version 1 (Component)EnvZ Signal Transduction and Kinase Domains
BBa_K209401BBa_K209401 Version 1 (Component)AarI B-C part, Rs1.3
BBa_J70044BBa_J70044 Version 1 (Component)6his part for use with BioScaffold parts (G)GATCC(glycine serine)-6his-TAA
BBa_M45099BBa_M45099 Version 1 (Component)Test group b
BBa_K510036BBa_K510036 Version 1 (Component)Improved Flip Flop (Module II: asRNA)
BBa_K2074018BBa_K2074018 Version 1 (Component)Intron-1 Rbc S2
BBa_M45098BBa_M45098 Version 1 (Component)Test group b