SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_B0032
BBa_B0032 Version 1 (Component)
RBS.3 (medium) -- derivative of BBa_0030

BBa_J61101
BBa_J61101 Version 1 (Component)
Ribosome Binding Site Family Member

BBa_J61120
BBa_J61120 Version 1 (Component)
Ribosome Binding Site Family Member

BBa_B0031
BBa_B0031 Version 1 (Component)
RBS.2 (weak) -- derivative of BBa_0030

hixC
BBa_J44000 Version 1 (Component)
hixC binding site for Salmonella typhimurium Hin recombinase

BBa_J61100
BBa_J61100 Version 1 (Component)
Ribosome Binding Site Family Member

BBa_J15001
BBa_J15001 Version 1 (Component)
strong synthetic E. coli ribosome binding site with SacI site.

BBa_B0033
BBa_B0033 Version 1 (Component)
RBS.4 (weaker) -- derivative of BBa_0030

BBa_K2066018
BBa_K2066018 Version 1 (Component)
UNS 2 Sequence, from Torella et al., 2013

BBa_J85600
BBa_J85600 Version 1 (Component)
attB1 recombination site

RBS-spoVG
BBa_K143021 Version 1 (Component)
SpoVG ribosome binding site (RBS) for B. subtilis

BBa_J05222
BBa_J05222 Version 1 (Component)
ZF-2*e2 Binding Site

BBa_J61127
BBa_J61127 Version 1 (Component)
Ribosome Binding Site Family Member

BBa_K1585999
BBa_K1585999 Version 1 (Component)
lacI binding site

BBa_J61107
BBa_J61107 Version 1 (Component)
Ribosome Binding Site Family Member

BBa_J05115
BBa_J05115 Version 1 (Component)
Repressor ZF-2*e2

BBa_J52008
BBa_J52008 Version 1 (Component)
luciferase: luciferin 2-monooxygenase from Renilla reniformis (EC 1.13.12.5; SwissProt:: P27652)

BBa_K1114107
BBa_K1114107 Version 1 (Component)
Bicistronic Design RBS 2, MoClo Format with BC fusion sites

RBS_cassette
RBS_cassette Version 1 (Component)
AvrII restriction site (cctagg), overlapped with RBS (aggagga)

VR
BBa_G00102 Version 1 (Component)
Reverse BioBrick primer annealing site (VR binding site)

BBa_K165012
BBa_K165012 Version 1 (Component)
Gli1 binding sites

BBa_J61117
BBa_J61117 Version 1 (Component)
Ribosome Binding Site Family Member

lox
BBa_J61046 Version 1 (Component)
[Lox] site for recombination

BBa_J05202
BBa_J05202 Version 1 (Component)
R3-e2 Binding Site

BBa_K118012
BBa_K118012 Version 1 (Component)
Synthetic ribosome binding site added by Son of Babel procedure

BBa_K1123010
BBa_K1123010 Version 1 (Component)
Ribosoom Binding Site

BBa_K1321002
BBa_K1321002 Version 1 (Component)
Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25

BBa_I13457
BBa_I13457 Version 1 (Component)
Improved insertion site with two RNAse E cut sites

PfadR
BBa_K861060 Version 1 (Component)
PfadR, synthetic promoter with tandem FadR binding site

BBa_K2066502
BBa_K2066502 Version 1 (Component)
1xTetO Binding Site

ArgBox8
BBa_K778003 Version 1 (Component)
ArgR binding sites （including 8 binding sites）

BBa_K1321003
BBa_K1321003 Version 1 (Component)
Re-entry of BBa_K863101, Cellulose Binding Domain CBDcex in rfc25

BBa_K165011
BBa_K165011 Version 1 (Component)
Zif268-HIV binding sites (3)

RBS-GsiB
BBa_K143020 Version 1 (Component)
GsiB ribosome binding site (RBS) for B. subtilis

BBa_I13452
BBa_I13452 Version 1 (Component)
Adds another BioBrick site

rbs+LIMS1
BBa_I742111 Version 1 (Component)
Limonene synthase gene with ribosome binding site

BBa_K1212005
BBa_K1212005 Version 1 (Component)
TALe Binding Site 2 (specific to TAL repressor 2)

rbs+COMT
BBa_I742109 Version 1 (Component)
COMT gene with ribosome binding site

BBa_K165002
BBa_K165002 Version 1 (Component)
Kozak sequence (yeast RBS)

ArgBox16
BBa_K778006 Version 1 (Component)
ArgR binding sites (including 16 binding sites)

OmpR_BS
BBa_I761001 Version 1 (Component)
OmpR binding site

BBa_J34801
BBa_J34801 Version 1 (Component)
ribosome binding site

T7 RBS
BBa_K1362090 Version 1 (Component)
strong T7 RBS

BBa_K1461316
BBa_K1461316 Version 1 (Component)
pEpCAM-RBS-GFP-2 miR 142 3p bindgin sites-2 miR 142 5p binding site-d.term

BBa_K1321009
BBa_K1321009 Version 1 (Component)
Nickel Binding Protein (NiBP) Freiburg format (RFC[25])

BBa_K150005
BBa_K150005 Version 1 (Component)
ribosome binding site of pTrc99a