Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J04450BBa_J04450 Version 1 (Component)RFP Coding Device
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
BBa_K314103BBa_K314103 Version 1 (Component)Lac induced expression cassette
BBa_I746352BBa_I746352 Version 1 (Component)delta activator from phiR73 phage
BBa_I746315BBa_I746315 Version 1 (Component)arabinose induced expression of phiR73 delta and mRFP
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
BBa_J56012BBa_J56012 Version 1 (Component)Invertible sequence of dna includes Ptrc promoter
BBa_I746313BBa_I746313 Version 1 (Component)arabinose induced expression of P2 ogr and mRFP
araCBBa_C0080 Version 1 (Component)araC arabinose operon regulatory protein (repressor/activator) from E. coli (+LVA)
AraBBa_K808000 Version 1 (Component)araC-Pbad - Arabinose inducible regulatory promoter/repressor unit
BBa_I746314BBa_I746314 Version 1 (Component)arabinose induced expression of PSP3 pag and mRFP
BBa_K249001BBa_K249001 Version 1 (Component)Arabinose Induced Inverter
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
mRFPrBBa_J31008 Version 1 (Component)RFP reverse
mRFP1BBa_I13502 Version 1 (Component)Screening plasmid intermediate
pSC101BBa_I50041 Version 1 (Component)pSC101 origin of replication, reverse
RFP2BBa_I715023 Version 1 (Component)Carboxyl portion of RFP
BBa_I746394BBa_I746394 Version 1 (Component)phiR73 delta inducing Psid promoter
BBa_I746392BBa_I746392 Version 1 (Component)phiR73 delta inducing PP promoter
BBa_I746395BBa_I746395 Version 1 (Component)phiR73 delta inducing PLL promoter
BBa_I13458BBa_I13458 Version 1 (Component)promoter C and arabinose C operon
RFP1BBa_I715022 Version 1 (Component)Amino Portion of RFP
BBa_K228863BBa_K228863 Version 1 (Component)PhiR73 delta with amber mutation
BBa_I746391BBa_I746391 Version 1 (Component)phiR73 delta inducing PO promoter
BBa_K1321338BBa_K1321338 Version 1 (Component)T7 Expression vector
mRFPBBa_K1615089 Version 1 (Component)mRFP RFC25
mRFP1BBa_E2050 Version 1 (Component)derivative of mRFP1, yeast-optimized
mCherryBBa_E2060 Version 1 (Component)derivative of mRFP1, yeast-optimized
BBa_K081014BBa_K081014 Version 1 (Component)RFP protein generator - PoPS->RFP
BBa_I13521BBa_I13521 Version 1 (Component)Ptet mRFP
BBa_I746309BBa_I746309 Version 1 (Component)phiR73 delta under control of pBAD/araC promoter
mRFP sel.BBa_K1362422 Version 1 (Component)mRFP selection marker with outward BsaI restriction sites
BBa_K1461208BBa_K1461208 Version 1 (Component)taRNA (arabinose-induced) (+d.term)
BBa_K314100BBa_K314100 Version 1 (Component)High constitutive expression cassette
BBa_I746342BBa_I746342 Version 1 (Component)phiR73 delta generator