iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
BBa_K116533BBa_K116533 Version 1 (Component)cyanobacterial KaiABC oscillator with pOmpC as output
BBa_K116530BBa_K116530 Version 1 (Component)cyanobacterial KaiABC oscillator with pOmpF as output
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
KaiABCBBa_K1745001 Version 1 (Component)KaiABC Oscillator
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
BBa_K2176002BBa_K2176002 Version 1 (Component)Cyanobacterial Kaic and KaiB
BBa_K116514BBa_K116514 Version 1 (Component)KaiABC with SasA output
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
BBa_K199018BBa_K199018 Version 1 (Component)pOmpC (with intrinsic RBS)
BBa_K228000BBa_K228000 Version 1 (Component)T7ptag(T7polymerase with amber mutation)
RBS-RFPBBa_K093005 Version 1 (Component)RFP with RBS
BBa_K2066527BBa_K2066527 Version 1 (Component)B0034 with scar TACTAG
BBa_K1051006BBa_K1051006 Version 1 (Component)Saccharomycescerevisiae TBY-1 terminator with stopcodon
Pr + GFPBBa_S03335 Version 1 (Component)Pr with GFP as a reporter
BBa_K769001BBa_K769001 Version 1 (Component)PompC-RBS-GFP-Double terminator
RBS_cassetteRBS_cassette Version 1 (Component)AvrII restriction site (cctagg), overlapped with RBS (aggagga)
KaiA_KaiC_BBa_J36335 Version 1 (Component)Lac+RBS+KaiA+Lac+RBS+KaiC
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
mCherryBBa_J06702 Version 1 (Component)mCherry, bacterial with RBS and forward terminator
BBa_I13977BBa_I13977 Version 1 (Component)intermediate for lac relaxation oscillator
BBa_K1321340BBa_K1321340 Version 1 (Component)Double CBD (dCBD) with N-terminal linker
KaiABC_expBBa_J36937 Version 1 (Component)Lac+RBS+KaiA+Lac+RBS+KaiC+Lac+RBS+KaiB
BBa_I13907BBa_I13907 Version 1 (Component)Ring Oscillator Synchronization Device (lac)
GFPBBa_K145015 Version 1 (Component)GFP with LVA tag
KaiABBa_J36801 Version 1 (Component)KaiA coding region
BBa_K1051008BBa_K1051008 Version 1 (Component)S. cerevisiae CAA terminator with stopcodon
BBa_K116504BBa_K116504 Version 1 (Component)Tet+RBS+KaiA+Ter+Lac+RBS+KaiB+Lac+RBS+KaiC
KaiCBBa_J36804 Version 1 (Component)KaiC coding region
BBa_K592020BBa_K592020 Version 1 (Component)PFixK2-lambda C1-B0034-amilCP blue light sensor output
PcpcB-KanaBBa_K1642003 Version 1 (Component)Kanamycin Resistance Cassette in Cyanobacteria
BBa_K199020BBa_K199020 Version 1 (Component)pOmpC (with intrinsic RBS)-GFP
BBa_K199042BBa_K199042 Version 1 (Component)pOmpC (with intrinsic RBS)-RFP
PompC-CS1BBa_K395303 Version 1 (Component)PompC(CS1) Promoter regulated by phosphorylated OmpR
PompC(C)BBa_K395301 Version 1 (Component)PompC(C) Promoter regulated by phosphorylated OmpR
BBa_K909005BBa_K909005 Version 1 (Component)cI protein with EYFP as a reporter
BBa_K1132008BBa_K1132008 Version 1 (Component)R4 riboregulator switch with with pTET and pOmpC
BBa_K116669BBa_K116669 Version 1 (Component)Oscillator + Tuner + Reporter
BBa_K1126013BBa_K1126013 Version 1 (Component)Promoter KaiBC