GFPGFP Version 1 (Unknown)Organism: Cryptococcus neoformans serotype A H99S
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
BBa_B0034BBa_B0034 Version 1 (Component)RBS (Elowitz 1999) -- defines RBS efficiency
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
GFPBBa_E0040 Version 1 (Component)green fluorescent protein derived from jellyfish Aequeora victoria wild-type GFP (SwissProt: P42212
BBa_B0030BBa_B0030 Version 1 (Component)RBS.1 (strong) -- modified from R. Weiss
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
pBad/araCBBa_I0500 Version 1 (Component)Inducible pBad/araC promoter
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
BBa_J04450BBa_J04450 Version 1 (Component)RFP Coding Device
BBa_I13453BBa_I13453 Version 1 (Component)Pbad promoter
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
pBADBBa_K206000 Version 1 (Component)pBAD strong
YFPBBa_E0032 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
RBS-RFPBBa_K093005 Version 1 (Component)RFP with RBS
GFP reportBBa_E0240 Version 1 (Component)GFP generator
tetA(C)fBBa_J31007 Version 1 (Component)tetracycline resistance protein TetA(C) (forward), [cf. BBa_J31006]
mCherryBBa_J06702 Version 1 (Component)mCherry, bacterial with RBS and forward terminator
pT7BBa_K525998 Version 1 (Component)Promoter T7 and RBS
eyfpBBa_E0030 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
T7 RBSBBa_K1362090 Version 1 (Component)strong T7 RBS
BBa_C0261BBa_C0261 Version 1 (Component)AHL-making Enzyme, luxI (+RBS)
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
GFP generaBBa_E0840 Version 1 (Component)GFP generator
//rbsrbs Version 1 (Collection) RBS-spoVGBBa_K143021 Version 1 (Component)SpoVG ribosome binding site (RBS) for B. subtilis
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
BBa_K315026BBa_K315026 Version 1 (Component)pTet + lox5171 forward + RBS + RFP + loxN forward
Scar 25BBa_B0105 Version 1 (Component)RFC 25 Scar Sequence
BBa_K315037BBa_K315037 Version 1 (Component)pBad + RBS + cre + pTet + lox5171 forward + RBS + RFP + loxN forward
BBa_J44001BBa_J44001 Version 1 (Component)Reverse RBS (RBS<sub>rev</sub>) -- corresponds to BBa_B0030
BBa_K315032BBa_K315032 Version 1 (Component)pBad + RBS + cre + pTet + loxP forward + RBS + RFP + lox5171 forward
BBa_E0430BBa_E0430 Version 1 (Component)EYFP (RBS+ LVA- TERM) (B0034.E0030.B0015)
BBa_K199118BBa_K199118 Version 1 (Component)T7 promoter + RBS + RFP
BBa_K315033BBa_K315033 Version 1 (Component)pBad + RBS + cre + pTet + lox5171 forward + RBS + RFP + lox5171 forward
BBa_K315029BBa_K315029 Version 1 (Component)pTet + lox5171 forward + RBS + RFP + lox5171 forward
RBS-GFP-TeBBa_I763020 Version 1 (Component)RBS-GFP (+LVA Tag)-Terminators
RBS_cassetteRBS_cassette Version 1 (Component)AvrII restriction site (cctagg), overlapped with RBS (aggagga)
BBa_K315016BBa_K315016 Version 1 (Component)pTet + loxP forward + RBS + RFP + lox5171 forward
BBa_K315038BBa_K315038 Version 1 (Component)pBad + RBS + cre + pTet + lox5171 forward + RBS + RFP + lox2272 forward
BBa_K315036BBa_K315036 Version 1 (Component)pBad + RBS + cre + pTet + lox5171 forward + RBS + RFP + loxm2 forward
BBa_K315039BBa_K315039 Version 1 (Component)pBad + RBS + cre + pTet + lox5171 forward + RBS + RFP + loxBri forward
CreBBa_J61047 Version 1 (Component)Cre DNA recombinase
BBa_K315030BBa_K315030 Version 1 (Component)pTet + loxP forward + RBS + RFP + lox 5171 forward