Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

iGEM Feature Libraries
igem_feature_libraries_collection Version 1 (Unknown)
A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).

Free Genes Feature Libraries
free_genes_feature_libraries_collection Version 1 (Unknown)
A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).

ACS Synbio Generation
ACS_Synbio_Generation Version 1 (Activity)
Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project

iGEM to SBOL conversion
igem2sbol Version 1 (Activity)
Conversion of the iGEM parts registry to SBOL2.1

SyBiOntKB to SBOL conversion
SyBiOntKB2sbol Version 1 (Activity)
Conversion of the Synthetic Biology Ontology knowledge base to SBOL 2.1

Sequence Cut Out of Plasmid
cut_out_of_plasmid Version 1 (Activity)
Used to indicate that a sequence was cut out of the plasmid referenced as the source

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Unknown Alteration Sequence Pull
Unknown Version 1 (Activity)
Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown

BBa_B0032
BBa_B0032 Version 1 (Component)
RBS.3 (medium) -- derivative of BBa_0030

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

mRFP1
BBa_E1010 Version 1 (Component)
**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)

BBa_B0031
BBa_B0031 Version 1 (Component)
RBS.2 (weak) -- derivative of BBa_0030

CD4 signal
BBa_I712009 Version 1 (Component)
CD4 signal peptide; localizes to plasma membrane

BBa_B0033
BBa_B0033 Version 1 (Component)
RBS.4 (weaker) -- derivative of BBa_0030

BBa_J56012
BBa_J56012 Version 1 (Component)
Invertible sequence of dna includes Ptrc promoter

SPzim17
BBa_K809201 Version 1 (Component)
signal peptide of ZIM17

SPtom22
BBa_K809206 Version 1 (Component)
signal peptide of Tom22

BBa_J36835
BBa_J36835 Version 1 (Component)
Lipoprotein signal peptide

pSC101
BBa_I50041 Version 1 (Component)
pSC101 origin of replication, reverse

BBa_K209402
BBa_K209402 Version 1 (Component)
AarI A-B part, signal sequence-FLAG-YFP [SSFYFP]

RFP_SPtom2
BBa_K809306 Version 1 (Component)
RFP + signal peptide of Tom22

BBa_K1462080
BBa_K1462080 Version 1 (Component)
TOM22

BBa_K554002
BBa_K554002 Version 1 (Component)
HlyA secretion signal peptide

YFP_SPtom2
BBa_K809318 Version 1 (Component)
YFP + signal peptide of Tom22

BBa_K809207
BBa_K809207 Version 1 (Component)
signal peptide of Tom20

SPtom70
BBa_K809205 Version 1 (Component)
signal peptide of Tom70

SPtom40
BBa_K809204 Version 1 (Component)
signal peptide of Tom40

SPfer
BBa_K809202 Version 1 (Component)
signal peptide of FER

BBa_K1592000
BBa_K1592000 Version 1 (Component)
LIP2 prepro(signal peptide)

BBa_K1351008
BBa_K1351008 Version 1 (Component)
Signal peptide of B. subtilis endonuclease YhcR

BBa_M36726
BBa_M36726 Version 1 (Component)
Type II Signal Peptide

BBa_K1159303
BBa_K1159303 Version 1 (Component)
Signal Peptide of SERK Receptor from <i>Physcomitrella patens</i> in RFC[25]

BBa_K1351026
BBa_K1351026 Version 1 (Component)
Signal peptide of B. subtilis major autolysin LytC

BBa_K1351027
BBa_K1351027 Version 1 (Component)
Signal peptide of B. subtilis minor autolysin LytE

BBa_I712010
BBa_I712010 Version 1 (Component)
CD4 sequence without signal peptide

BBa_K208003
BBa_K208003 Version 1 (Component)
OmpA Signal Peptide - Silver Fusion Compatible

BBa_K208004
BBa_K208004 Version 1 (Component)
PelB Signal Peptide - Silver Fusion Compatible

BBa_K809301
BBa_K809301 Version 1 (Component)
RFP + signal peptide of ZIM17

BBa_K208005
BBa_K208005 Version 1 (Component)
TorA Signal Peptide - Silver Fusion Compatible

YFP_SPtom7
BBa_K809317 Version 1 (Component)
YFP + signal peptide of Tom70

Toc34_SPto
BBa_K809324 Version 1 (Component)
signal peptide of Tom70 + Toc34

Toc75_SPto
BBa_K809326 Version 1 (Component)
signal peptide of Tom40 + Toc75

BBa_K541526
BBa_K541526 Version 1 (Component)
reflectin for b.subtilis with LipA signal peptide

YFP_SPtim2
BBa_K809315 Version 1 (Component)
YFP + signal peptide of Tim21

RFY_SPfer
BBa_K809302 Version 1 (Component)
RFP + signal peptide of FER

YFP_SPzim1
BBa_K809313 Version 1 (Component)
YFP + signal peptide of ZIM17

RFP_SPtom7
BBa_K809305 Version 1 (Component)
RFP + signal peptide of Tom70