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Public
iGEM Feature Libraries
igem_feature_libraries_collection Version 1 (Unknown)
A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Public
Free Genes Feature Libraries
free_genes_feature_libraries_collection Version 1 (Unknown)
A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Public
Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Public
Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Public
SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Public
SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Public
GFP
BBa_E0040 Version 1 (Component)
green fluorescent protein derived from jellyfish Aequeora victoria wild-type GFP (SwissProt: P42212
Public
mRFP1
BBa_E1010 Version 1 (Component)
**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
Public
SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Public
mCherry
BBa_J06504 Version 1 (Component)
monomeric RFP optimized for bacteria
Public
eyfp
BBa_E0030 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP
Public
luxI
BBa_C0061 Version 1 (Component)
autoinducer synthetase for AHL
Public
CcpA
BO_11480 Version 1 (Component)

Public
LexA
BO_11408 Version 1 (Component)

Public
ComK
BO_11197 Version 1 (Component)

Public
YFP
BBa_E0032 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP
Public
ecfp
BBa_E0020 Version 1 (Component)
engineered cyan fluorescent protein derived from A. victoria GFP
Public
BBa_K808027
BBa_K808027 Version 1 (Component)
EstA : inactive fusion protein for bacterial surface expression
Public
SpoIIL
BO_26996 Version 1 (Component)

Public
AbrB
BO_9091 Version 1 (Component)

Public
GerE
BO_11469 Version 1 (Component)

Public
BBa_K880005
BBa_K880005 Version 1 (Component)
Strong promoter, strong RBS combination for high expression levels of proteins
Public
TnrA
BO_11240 Version 1 (Component)

Public
SpoIIID
BO_9027 Version 1 (Component)

Public
Fur
BO_11498 Version 1 (Component)

Public
PhoP
BO_26226 Version 1 (Component)

Public
ECFP
BBa_E0022 Version 1 (Component)
enhanced cyan fluorescent protein derived from A. victoria GFP
Public
OmpA
BBa_K103006 Version 1 (Component)
OmpA outer membrane protein A fused to linker; displays proteins on cell surface
Public
mCherry
BBa_J06505 Version 1 (Component)
monomeric RFP optimized for bacteria
Public
BBa_K314103
BBa_K314103 Version 1 (Component)
Lac induced expression cassette
Public
hixC
BBa_J44000 Version 1 (Component)
hixC binding site for Salmonella typhimurium Hin recombinase
Public
LuxR
BBa_I0462 Version 1 (Component)
luxR Protein Generator
Public
mCherry
BBa_J06702 Version 1 (Component)
mCherry, bacterial with RBS and forward terminator
Public
PerR
BO_9186 Version 1 (Component)

Public
PurR
BO_9092 Version 1 (Component)

Public
yfp
BBa_K165005 Version 1 (Component)
Venus YFP, yeast optimized for fusion
Public
tetA(C)f
BBa_J31007 Version 1 (Component)
tetracycline resistance protein TetA(C) (forward), [cf. BBa_J31006]
Public
BBa_K208014
BBa_K208014 Version 1 (Component)
GFP (Silver Fusion)/Double Terminator
Public
cheZ
BBa_K629003 Version 1 (Component)
cheZ, chemotaxis regulator, protein phosphatase for CheY
Public
Hpr
BO_9167 Version 1 (Component)

Public
BBa_K633001
BBa_K633001 Version 1 (Component)
Linker + EstA Membrane Protein
Public
luxI
BBa_C0161 Version 1 (Component)
autoinducer synthetase for AHL (no LVA)
Public
BBa_K1321338
BBa_K1321338 Version 1 (Component)
T7 Expression vector
Public
lasI
BBa_C0078 Version 1 (Component)
autoinducer synthetase for PAI from Pseudomonas aeruginosa
Public
DnaA
BO_9088 Version 1 (Component)

Public
YpxD
BO_26963 Version 1 (Component)

Public
mCherry
BBa_K165004 Version 1 (Component)
mCherry, yeast optimized for fusion
Public
araC
BBa_C0080 Version 1 (Component)
araC arabinose operon regulatory protein (repressor/activator) from E. coli (+LVA)
Public
YacG
BO_9098 Version 1 (Component)

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