Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
His-StopBBa_K133133 Version 1 (Component)His affinity tag-stop
RGD-His-StBBa_K133036 Version 1 (Component)RGD-His affinity tag-Stop
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
HisBBa_K157011 Version 1 (Component)His affinity tag; Freiburg standard
BBa_B0053BBa_B0053 Version 1 (Component)Terminator (His)
His-ScaffoBBa_K1602027 Version 1 (Component)Protein scaffold with N-terminal HisTag
xisBBa_K112200 Version 1 (Component){xis!} from bacteriophage lambda; assembly standard 21
FosBBa_K243027 Version 1 (Component)His-FOS
amyE 5 ISBBa_K143001 Version 1 (Component)5??? Integration Sequence for the amyE locus of B. subtilis
eGFP+HisBBa_K193202 Version 1 (Component)EGFP(enhanced Green Fluorescent Protein) with His tag
FosBBa_M36501 Version 1 (Component)Fos-p1n
yfiSBO_31094 Version 1 (Component) HisBBa_K128005 Version 1 (Component)His affinity tag
FliSBO_11069 Version 1 (Component) fliSBO_31692 Version 1 (Component) fusBO_29183 Version 1 (Component) YfiSBO_9154 Version 1 (Component) BclA-HisBBa_K1933000 Version 1 (Component)N-terminal domain of BclA protein fused to 6xHis tag
HisBBa_M0021 Version 1 (Component)Poly-His affinity tag
His-Sc_Si4BBa_K1602030 Version 1 (Component)HisTag-Scaffold_Si4-Tag fusion protein
xis/intBBa_K112234 Version 1 (Component){rbs.xis.int!} The bacteriophage lambda xis/integrase gene with native rbs and stop codon; assembly
HisBBa_K112703 Version 1 (Component)His affinity tag
HisBBa_I757013 Version 1 (Component)His affinity tag
BBa_K1491005BBa_K1491005 Version 1 (Component)RBS-SuperYFP2-His
xisBBa_K112204 Version 1 (Component){a~xis!} The bacteriophage lambda xis gene ready to have rbs attached and stop codon; assembly stand
xisBBa_K112001 Version 1 (Component)Xis from bacteriophage lambda, assembly standard 21
xisBBa_K112205 Version 1 (Component){rbs.xis!} The xis gene with native rbs site and stop codon; assembly standard 21
RBS-His-ScBBa_K1602031 Version 1 (Component)HisTag-Scaffold_Si4-Tag fusion protein with RBS BBa_B0034
HR-HisBBa_K1642001 Version 1 (Component)Codon-optimized Halorhodopsin with His-tag
BBa_K1493601BBa_K1493601 Version 1 (Component)Kis Antitoxin (Kis-Kid Toxin-Antitoxin System)
BBa_K1404007BBa_K1404007 Version 1 (Component)p70-CsgA-His, His-tagged curli generator
Signal FilBBa_K2036020 Version 1 (Component)RBS-CI-TT-pR-RBS-CIII-RBS-RFP-LAAssrAtag-TT-pRM-RBS-GFP-LVAssrAtag
BBa_K1491007BBa_K1491007 Version 1 (Component)RBS-mOrange-His
xis domainBBa_K112203 Version 1 (Component){< xis >} The bacteriophage lambda xis gene without start or stop codons; assembly standard 21
Met-HisBBa_K133035 Version 1 (Component)Methionine-His affinity tag
BBa_I742114BBa_I742114 Version 1 (Component)Feruloyl-CoA synthase (fcs)
BBa_K1632001BBa_K1632001 Version 1 (Component)fim switch[default OFF](Tokyo_Tech/J23119)