iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
OmpRBBa_R0082 Version 1 (Component)Promoter (OmpR, positive)
BBa_F2620BBa_F2620 Version 1 (Component)3OC<sub>6</sub>HSL -> PoPS Receiver
BBa_P0440BBa_P0440 Version 1 (Component)PoPS -> TetR [S0151]
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
BBa_P0412BBa_P0412 Version 1 (Component)PoPS -> LacI [S0150]
BBa_J13002BBa_J13002 Version 1 (Component)TetR repressed POPS/RIPS generator
BBa_M36604BBa_M36604 Version 1 (Component)Heat-->PoPS (with postive feedback loop)
OmpRBBa_R0084 Version 1 (Component)Promoter (OmpR, positive)
BBa_K081014BBa_K081014 Version 1 (Component)RFP protein generator - PoPS->RFP
BBa_P0451BBa_P0451 Version 1 (Component)PoPS -> cI (lambda) [S0153]
OmpRBBa_R0083 Version 1 (Component)Promoter (OmpR, positive)
AraC O2BBa_R0081 Version 1 (Component)Inhibitor (AraC loop attachment with O2 site)
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
BBa_K176028BBa_K176028 Version 1 (Component)TetR repressible AHL->PoPS Receiver (Very High LuxR): pCon 0.70->luxR+pLux/Tet->PoPS
BBa_K199131BBa_K199131 Version 1 (Component)Lux positive feedback loop with 2 sites
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
BBa_K098995BBa_K098995 Version 1 (Component)heat sensitive cI QPI with high promoter
pLux/TetBBa_K176000 Version 1 (Component)pLux/Tet Hybrid Promoter: (LuxR+,TetR-)->PoPS
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
BBa_K199145BBa_K199145 Version 1 (Component)Lux positive feedback loop (CGGUC 1-SAT)
BBa_K199144BBa_K199144 Version 1 (Component)Lux positive feedback loop (CCACU 1-SAT)
BBa_K199147BBa_K199147 Version 1 (Component)Lux positive feedback loop (CCAUC 1-SAT)
BBa_P0140BBa_P0140 Version 1 (Component)PoPS -> TetR [S0163]
BBa_P0151BBa_P0151 Version 1 (Component)PoPS -> cI (lambda) [S0165]
BBa_K228000BBa_K228000 Version 1 (Component)T7ptag(T7polymerase with amber mutation)
BBa_K1461221BBa_K1461221 Version 1 (Component)ecf20 generator (positive feedback)
BBa_K1461222BBa_K1461222 Version 1 (Component)ecf11 generator (positive feedback)
RBS-RFPBBa_K093005 Version 1 (Component)RFP with RBS
BBa_K081012BBa_K081012 Version 1 (Component)GFP protein generator - PoPS->GFP
BBa_K2066527BBa_K2066527 Version 1 (Component)B0034 with scar TACTAG
BBa_K176063BBa_K176063 Version 1 (Component)PoPS->RBS(weak)+lacZalpha-ccdB+T
BBa_K176062BBa_K176062 Version 1 (Component)PoPS->RBS(weak)+ccdB+T
BBa_K300002BBa_K300002 Version 1 (Component)Phasin (PhaP) - head domain
BBa_P0152BBa_P0152 Version 1 (Component)PoPS -> cI (434) [S0166]
BBa_K2110002BBa_K2110002 Version 1 (Component)TPA positive feedback regulatory gene.
BBa_P0153BBa_P0153 Version 1 (Component)PoPS -> cII (p22) [S0167]
BBa_K081016BBa_K081016 Version 1 (Component)lasI protein generator - PoPS->lasI
BBa_P0312BBa_P0312 Version 1 (Component)PoPS -> LacI [S0156]
BBa_K1461233BBa_K1461233 Version 1 (Component)ecf20 promoter mesurement system (positive feedback)
BBa_K1461234BBa_K1461234 Version 1 (Component)ecf11 promoter mesurement system (positive feedback)
HSPBBa_K338001 Version 1 (Component)Heat Shock Promoter (HSP)
BBa_K1051006BBa_K1051006 Version 1 (Component)Saccharomycescerevisiae TBY-1 terminator with stopcodon