Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
ATGATG Version 1 (Component) GFP reportBBa_E0240 Version 1 (Component)GFP generator
Scar25 ATGBBa_K1319106 Version 1 (Component)RFC 25 Translation Start Scar Sequence
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
His-StopBBa_K133133 Version 1 (Component)His affinity tag-stop
BBa_J04031BBa_J04031 Version 1 (Component)GFP w/LVA tag
RGD-His-StBBa_K133036 Version 1 (Component)RGD-His affinity tag-Stop
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
HABBa_I712008 Version 1 (Component)HA affinity tag
NLSBBa_J176008 Version 1 (Component)NLS
BBa_K105012BBa_K105012 Version 1 (Component)10 aa flexible protein domain linker
PESTBBa_J176018 Version 1 (Component)PEST
linkerBBa_K133132 Version 1 (Component)8 aa protein domain linker
ModLacBBa_K1688020 Version 1 (Component)ModLac laccase with His-tag and HlyA export tag
BBa_K1688006BBa_K1688006 Version 1 (Component)ModLac laccase with His-tag and HlyA export tag (inc RBS)
NLSmycSTOPBBa_J176031 Version 1 (Component)NLS myc stop
HisTagBBa_J18909 Version 1 (Component)His tag (6xHis; E. coli - optimized)
BBa_J04051BBa_J04051 Version 1 (Component)RFP with tag
ModLacBBa_K1688021 Version 1 (Component)ModLac laccase with His-tag
BBa_K863005BBa_K863005 Version 1 (Component)ecol laccase from E. coli with T7 promoter, RBS and His-tag
G-His6(N)BBa_K1362430 Version 1 (Component)C-terminal His6 (N-Intein)
BBa_K249008BBa_K249008 Version 1 (Component)YFP with N-terminal Arganine Tag
BBa_K416003BBa_K416003 Version 1 (Component)Yeast Secretion Tag
RBS-GFP-TeBBa_I763020 Version 1 (Component)RBS-GFP (+LVA Tag)-Terminators
BBa_J70042BBa_J70042 Version 1 (Component)6his part for use with BioScaffold parts ATG-6his-GGATCC (glycine serine)
BBa_K1688007BBa_K1688007 Version 1 (Component)ModLac laccase with His-tag and HlyA export tag (inc RBS and J23110 promoter)
polyABBa_J176009 Version 1 (Component)polyA2
BBa_K249006BBa_K249006 Version 1 (Component)Fusion EYFP with C-terminal Arginine Tag
BBa_K1166002BBa_K1166002 Version 1 (Component)HlyA-tag+Secretion system
BBa_K863000BBa_K863000 Version 1 (Component)bpul (laccase from Bacillus pumilus) with T7 promoter, RBS and HIS tag
BBa_K863010BBa_K863010 Version 1 (Component)tthl laccase from Thermus thermophilus with T7 promoter, RBS and His-tag
BBa_K863020BBa_K863020 Version 1 (Component)bhal laccase from Bacillus halodurans with T7 promoter, RBS and His-tag
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_J70044BBa_J70044 Version 1 (Component)6his part for use with BioScaffold parts (G)GATCC(glycine serine)-6his-TAA
His6BBa_K1362431 Version 1 (Component)N-terminal His6 (C-Intein)
BBa_K1189009BBa_K1189009 Version 1 (Component)Beta-lactamase with His Tag
DioxyBBa_K1688022 Version 1 (Component)Catechol 1,2 Dioxygenase + HlyA export tag
BBa_K208003BBa_K208003 Version 1 (Component)OmpA Signal Peptide - Silver Fusion Compatible