GFPGFP Version 1 (Unknown)Organism: Cryptococcus neoformans serotype A H99S
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
GFPBBa_E0040 Version 1 (Component)green fluorescent protein derived from jellyfish Aequeora victoria wild-type GFP (SwissProt: P42212
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Reverse Orientation Sequence Pullreverse_orientation Version 1 (Activity)Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
Codon Optimised Sequence Pullcodon_optimisation Version 1 (Activity)Used to indicate that a sequence was codon optimised after pulling from the source and before submission
Amp CasBBa_I13800 Version 1 (Component)Ampicillin Resistance Cassette
GFP reportBBa_E0240 Version 1 (Component)GFP generator
P(Lac) IQBBa_I14032 Version 1 (Component)promoter P(Lac) IQ
BBa_J04450BBa_J04450 Version 1 (Component)RFP Coding Device
YFPBBa_E0032 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
eyfpBBa_E0030 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
GFP generaBBa_E0840 Version 1 (Component)GFP generator
ecfpBBa_E0020 Version 1 (Component)engineered cyan fluorescent protein derived from A. victoria GFP
BBa_K864400BBa_K864400 Version 1 (Component)Ptac, trp & lac regulated promoter
ECFPBBa_E0022 Version 1 (Component)enhanced cyan fluorescent protein derived from A. victoria GFP
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Truncated Sequence PullTruncated Version 1 (Activity)Used to indicate that a sequence was truncated after pulling from the source and before submission
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
pLacBBa_K1638000 Version 1 (Component)Lac operator
BBa_K314103BBa_K314103 Version 1 (Component)Lac induced expression cassette
GFPBBa_K145015 Version 1 (Component)GFP with LVA tag
BBa_I746916BBa_I746916 Version 1 (Component)superfolder GFP coding sequence
BBa_I715039BBa_I715039 Version 1 (Component)pLac-RBS-RFP
BBa_I715040BBa_I715040 Version 1 (Component)pLac-RBS-RFP-RBS-GFP
GFP1BBa_I715019 Version 1 (Component)Amino Half of GFP (aka GFP1)
BBa_J33207BBa_J33207 Version 1 (Component)lac promoter and lacZ
GFP2BBa_I715020 Version 1 (Component)Carboxyl Half of GFP (aka GFP2)
Las CIOBBa_I14016 Version 1 (Component)P(Las) CIO
BBa_J54103BBa_J54103 Version 1 (Component)Promoterless-GFP(A)
BFPBBa_K592100 Version 1 (Component)Blue Fluorescent Protein (mTagBFP)
RBS-RFPBBa_K093005 Version 1 (Component)RFP with RBS
EYFPBBa_E0034 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
pLac+GFPBBa_I763004 Version 1 (Component)GFP coding device switched on by IPTG
YFPBBa_K592101 Version 1 (Component)Yellow Fluorescent Protein (YFP)
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
BBa_K741002BBa_K741002 Version 1 (Component)plac-RBS-GFP-T
BBa_K208014BBa_K208014 Version 1 (Component)GFP (Silver Fusion)/Double Terminator
dxsBBa_K118000 Version 1 (Component)dxs coding sequence encoding 1-deoxyxylulose-5-phosphate synthase