Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0030BBa_B0030 Version 1 (Component)RBS.1 (strong) -- modified from R. Weiss
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
pBADBBa_K206000 Version 1 (Component)pBAD strong
BBa_I712074BBa_I712074 Version 1 (Component)T7 promoter (strong promoter from T7 bacteriophage)
BBa_M36010BBa_M36010 Version 1 (Component)Transcription Terminator (Strong)
BBa_J52006BBa_J52006 Version 1 (Component)Some very strange part
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
BBa_K608002BBa_K608002 Version 1 (Component)strong Promoter and strong RBS
T7 RBSBBa_K1362090 Version 1 (Component)strong T7 RBS
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
BBa_K209402BBa_K209402 Version 1 (Component)AarI A-B part, signal sequence-FLAG-YFP [SSFYFP]
BBa_K176028BBa_K176028 Version 1 (Component)TetR repressible AHL->PoPS Receiver (Very High LuxR): pCon 0.70->luxR+pLux/Tet->PoPS
BBa_J52005BBa_J52005 Version 1 (Component)very strange composition
BBa_I741000BBa_I741000 Version 1 (Component)some crazy part
BBa_K209400BBa_K209400 Version 1 (Component)AarI B-C part, hM4D
ComEBBa_K1379051 Version 1 (Component)<i>S. pneumoniae</i> ComE CDS
LAABBa_M0050 Version 1 (Component)AANDENYALAA. (Very fast) SsrA degradation tag.
BBa_S03119BBa_S03119 Version 1 (Component)--Specify Parts List--
BBa_K362004BBa_K362004 Version 1 (Component)sodA promoter is controlled by some transcription factors including SoxS.
BBa_K209415BBa_K209415 Version 1 (Component)AarI B-C part, hM2D
BBa_K737017BBa_K737017 Version 1 (Component)This part conteins gvpC-20psi protein
BBa_J70042BBa_J70042 Version 1 (Component)6his part for use with BioScaffold parts ATG-6his-GGATCC (glycine serine)
BBa_T1001BBa_T1001 Version 1 (Component)Kill this part
yomEBO_30070 Version 1 (Component) YomEBO_2285 Version 1 (Component) BBa_K608003BBa_K608003 Version 1 (Component)strong Promoter , medium RBS
BBa_J107041BBa_J107041 Version 1 (Component)heat-inducible TetR (with very strong RBS)
BBa_K209401BBa_K209401 Version 1 (Component)AarI B-C part, Rs1.3
BBa_M1599BBa_M1599 Version 1 (Component)some gene
BBa_J70044BBa_J70044 Version 1 (Component)6his part for use with BioScaffold parts (G)GATCC(glycine serine)-6his-TAA
BBa_K1613006BBa_K1613006 Version 1 (Component)A composite part that can detect some toxins.
BBa_K1613007BBa_K1613007 Version 1 (Component)A composite part that can detect some toxins.
BBa_K1613005BBa_K1613005 Version 1 (Component)A composite part that can detect some toxins.
BBa_M1591BBa_M1591 Version 1 (Component)some gene
BBa_K1051004BBa_K1051004 Version 1 (Component)Stop codon free mOrange in RFC[23] standard
BBa_K737016BBa_K737016 Version 1 (Component)This part conteins gvpA protein's coding sequence.
ComEBBa_K316016 Version 1 (Component)ComE transcription factor phosphorylation-activated by ComD
BBa_K1440088BBa_K1440088 Version 1 (Component)long parts consist of part2 and part3
BBa_J70010BBa_J70010 Version 1 (Component)A BioScaffold Part (Uses PpiI), for offset see Part Design page
nadEBBa_K1373000 Version 1 (Component)This part encodes NAD synthetase
BBa_J70019BBa_J70019 Version 1 (Component)PsrI Right Testing Part for LASR parts
BBa_K316019BBa_K316019 Version 1 (Component)Reverse strand coding ComE responsive promoter