Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
pUVBBa_I765001 Version 1 (Component)UV promoter
BBa_J22151BBa_J22151 Version 1 (Component)UV-switch circuit
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
UV-WGBBa_K994000 Version 1 (Component)UV- Responsive Wintergreen Odor
BBa_K1499200BBa_K1499200 Version 1 (Component)Deinococcus radiodurans UV DNA damage endonuclease - uvsE
BBa_K1673101BBa_K1673101 Version 1 (Component)UV-Resistant RFP
BBa_I765007BBa_I765007 Version 1 (Component)Fe and UV promoters
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
BBa_K2005060BBa_K2005060 Version 1 (Component)GFP (UV-resistant)
BBa_K909009BBa_K909009 Version 1 (Component)cDNA of UV-B sensing protein UVR8 from Arabidopsis thaliana
UirRBBa_K1725420 Version 1 (Component)UirR (UV intensity response Regulator)
SwitchBBa_K1185000 Version 1 (Component)B.subtilis Rod to L-form Switch
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
BBa_K1673010BBa_K1673010 Version 1 (Component)Partially UV-Resistant RFP
BBa_K1673103BBa_K1673103 Version 1 (Component)UV Mutation Maximizied RFP
BBa_K2005090BBa_K2005090 Version 1 (Component)CAN1, UV-resistant
BBa_M50023BBa_M50023 Version 1 (Component)UV sensitive promoter
BBa_K2005091BBa_K2005091 Version 1 (Component)CAN1, UV-maximized
BBa_K228000BBa_K228000 Version 1 (Component)T7ptag(T7polymerase with amber mutation)
BBa_K1354000BBa_K1354000 Version 1 (Component)UV Promoter with Phage Activator
BBa_K1150030BBa_K1150030 Version 1 (Component)uniCAS UV Light Switch Part II - Activator
BBa_K1150031BBa_K1150031 Version 1 (Component)uniCAS UV Light Switch Part II - Repressor
UV SensorBBa_K154000 Version 1 (Component)recA promoter (J22106) + LacZ gene (I732017): DNA damage sensor
BBa_K1150029BBa_K1150029 Version 1 (Component)uniCAS UV Light Switch Part I - Stimulator
RBS-RFPBBa_K093005 Version 1 (Component)RFP with RBS
BBa_K1283002BBa_K1283002 Version 1 (Component)UV-Resoponsive Generators
BBa_K396003BBa_K396003 Version 1 (Component)UV light GFP with LVA tag
SwitchBBa_K1185005 Version 1 (Component)E. coli L-form Switch
recApBBa_K629001 Version 1 (Component)recAp, could be started with exposure to irradiation, UV, nalidixic acid
BBa_K2005002BBa_K2005002 Version 1 (Component)LacZ-alpha, UV-maximized
BBa_K2005001BBa_K2005001 Version 1 (Component)LacZ-alpha, UV-resistant
BBa_K1150032BBa_K1150032 Version 1 (Component)uniCAS UV Light Switch Part II - Histone Modifier
BBa_K1673111BBa_K1673111 Version 1 (Component)UV-Resistant RFP with IPTG Promoter
BBa_K1673121BBa_K1673121 Version 1 (Component)UV-Resistant RFP with T7 Promoter
BBa_K2066527BBa_K2066527 Version 1 (Component)B0034 with scar TACTAG
BBa_K1673304BBa_K1673304 Version 1 (Component)umuDC UV-Inducible Promoter
ToggleBBa_K415300 Version 1 (Component)Collins UV Toggle - Ptrc:cI:tt:Plambda:lacI:tt
recNpBBa_K629002 Version 1 (Component)recNp, could be started with exposure to irradiation, UV, nalidixic acid
BBa_K1673102BBa_K1673102 Version 1 (Component)UV Mutation Optimized RFP (Improved Expression)