ACS Synbio Generation
ACS_Synbio_Generation Version 1 (Activity)
Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Sequence Cut Out of Plasmid
cut_out_of_plasmid Version 1 (Activity)
Used to indicate that a sequence was cut out of the plasmid referenced as the source

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_K603001
BBa_K603001 Version 1 (Component)
mitochondrial proteorhodopsin WZK (same as K603000)

OmpA
BBa_K103006 Version 1 (Component)
OmpA outer membrane protein A fused to linker; displays proteins on cell surface

BBa_K603000
BBa_K603000 Version 1 (Component)
mitochondrial proteorhodopsin

BBa_K773002
BBa_K773002 Version 1 (Component)
Proteorhodopsin

mtGFP
BBa_K809001 Version 1 (Component)
Mitochondrial GFP

TAL
BBa_K1033000 Version 1 (Component)
Tyrosine ammonia-lyase (TAL) with RBS

BBa_T1012
BBa_T1012 Version 1 (Component)
Test K206000 without K628000

BBa_K103003
BBa_K103003 Version 1 (Component)
B domain of Staphylococcal protein A

BBa_K238019
BBa_K238019 Version 1 (Component)
sam8+sam5

BBa_K572005
BBa_K572005 Version 1 (Component)
Proteorhodopsin

BBa_K238021
BBa_K238021 Version 1 (Component)
promoter + sam8 + sam5 + COMT

BBa_S05060
BBa_S05060 Version 1 (Component)
K873000:B0015

Biosurfact
BBa_K653000 Version 1 (Component)
Re-designing "The Biosurfactator" The first Central American BioBrick

BBa_K602000
BBa_K602000 Version 1 (Component)
<i>Deinococcus radiodurans</i> PprI

BBa_K101000
BBa_K101000 Version 1 (Component)
Dual-Repressed Promoter for p22 mnt and TetR

BBa_K572006
BBa_K572006 Version 1 (Component)
Proteorhodopsin Generator

BBa_K663000
BBa_K663000 Version 1 (Component)
Homoserine lactone sensor

BBa_K203000
BBa_K203000 Version 1 (Component)
Plasma membrane targeting (GPI anchor)

BBa_K643000
BBa_K643000 Version 1 (Component)
CDS7 cadmium sulfate binding peptide coding sequence

sam8
BBa_I742142 Version 1 (Component)
sam8 (tyrosine-ammonia lyase) coding sequence

BBa_K613000
BBa_K613000 Version 1 (Component)
Medium-strength Plac promoter

BBa_K936015
BBa_K936015 Version 1 (Component)
K206000+B0034

BBa_K1604000
BBa_K1604000 Version 1 (Component)
Strong RBS + Proteorhodopsin

BBa_K1603000
BBa_K1603000 Version 1 (Component)
Fusion GPCR STE2MAM2

BBa_K303000
BBa_K303000 Version 1 (Component)
Ptet/ara with J23106

BBa_K103008
BBa_K103008 Version 1 (Component)
TEM-1 beta-lactamase subunit alpha with linker

BBa_K608000
BBa_K608000 Version 1 (Component)
Second of two required phycocyanobilin biosynthetic genes combined with a terminator

BBa_I711033
BBa_I711033 Version 1 (Component)
Proteorhodopsin (light-activated proton pump)

BBa_K1604010
BBa_K1604010 Version 1 (Component)
araC-pBAD + Proteorhodopsin

BBa_K238022
BBa_K238022 Version 1 (Component)
promoter + sam8+ sam5 + COMT + terminator

BBa_S05076
BBa_S05076 Version 1 (Component)
I0500:K103006

COX3 termi
BBa_K809005 Version 1 (Component)
Terminator of Yeast mitochondrial gene COX3

BBa_K936020
BBa_K936020 Version 1 (Component)
K206000+B0034+pelB+Cutinase+Polyhistidine Tag

BBa_K1051105
BBa_K1051105 Version 1 (Component)
TOM40;targeting peptide to mitochondria outer membrane

BBa_I711040
BBa_I711040 Version 1 (Component)
proteorhodopsin generator

PN
BBa_K100000 Version 1 (Component)
Natural Xylose Regulated Bi-Directional Operator

AID
BBa_K103001 Version 1 (Component)
AID protein

OLI1 RBS
BBa_K809009 Version 1 (Component)
RBS sequence of yeast mitochondrial gene OLI1

mamE
BBa_K590001 Version 1 (Component)
mamE, from <i>Magnetospirillum magneticum</i>

BBa_I742145
BBa_I742145 Version 1 (Component)
sam5 native rbs

BBa_S05318
BBa_S05318 Version 1 (Component)
K1601006:K1601000

BBa_S05070
BBa_S05070 Version 1 (Component)
K743000:P1003

BBa_S04569
BBa_S04569 Version 1 (Component)
S04568:K208000

BBa_K1583112
BBa_K1583112 Version 1 (Component)
pRha + CsgA & GFP in same operon