Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Direct Sequence Pull
direct Version 1 (Activity)
Used to indicate that a sequence was pulled directly from a source with no alterations made

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

luxr
BBa_C0062 Version 1 (Component)
luxR repressor/activator, (no LVA?)

Scar25 ATG
BBa_K1319106 Version 1 (Component)
RFC 25 Translation Start Scar Sequence

cI lam
BBa_C0051 Version 1 (Component)
cI repressor from E. coli phage lambda (+LVA)

cI lam
BBa_R0051 Version 1 (Component)
promoter (lambda cI regulated)

luxI
BBa_C0161 Version 1 (Component)
autoinducer synthetase for AHL (no LVA)

lasR
BBa_C0179 Version 1 (Component)
lasR activator from P. aeruginosa PAO1(no LVA)

BBa_J72105
BBa_J72105 Version 1 (Component)
{cin, no start, frameshift}{repL no start}{rbs.pacA}

RFC105 A
BBa_K1362414 Version 1 (Component)
N-terminal start overhang (T)(A)-(G)ATG=RBS+Start RFC[105] A

rhIR
BBa_C0171 Version 1 (Component)
rhlR repressor/activator from P. aeruginosa PA3477 (no LVA)

BBa_K809601
BBa_K809601 Version 1 (Component)
GAL promoter (kozak) without start codon ATG

BBa_J72103
BBa_J72103 Version 1 (Component)
{araC-Pbad}{rbs.coi}{double terminator}{cin, no start, frameshift}{repL no start}{LPsit}{rbs.pacA}{T

BBa_J72115
BBa_J72115 Version 1 (Component)
{araC-Pbad}{rbs.coi}{double terminator}{cin, no start, frameshift}{repL no start}

cI+luxR
BBa_R0065 Version 1 (Component)
Promoter (lambda cI and luxR regulated -- hybrid)

BBa_C0056
BBa_C0056 Version 1 (Component)
cI repressor from phage 434 (no LVA)

aiiA
BBa_C0160 Version 1 (Component)
autoinducer inactivation enzyme aiiA (no LVA)

T7start
BBa_J18912 Version 1 (Component)
T7 promoter + RBS + START

lasI
BBa_C0178 Version 1 (Component)
autoinducer synthetase for PAI from Pseudomonas aeruginosa (no LVA)

BBa_J72079
BBa_J72079 Version 1 (Component)
{cin, no start, frameshift} in BglBrick format

BBa_J72116
BBa_J72116 Version 1 (Component)
{araC-Pbad}{rbs.coi}{double terminator}{cin, no start, frameshift}{LPsit}{rbs.pacA}{TrnpB}

BBa_M36009
BBa_M36009 Version 1 (Component)
5' Bicistronic UTR (strong), does not include ATG start

BBa_J72080
BBa_J72080 Version 1 (Component)
{repL, no start} in BglBrick Format

BBa_J36841
BBa_J36841 Version 1 (Component)
Streptavidin, wild-type core + His6 tag (no start codon)

BBa_J72096
BBa_J72096 Version 1 (Component)
{araC-Pbad}{rbs.coi}{double terminator}{repL no start}{LPsit}{rbs.pacA}{TrnpB}

BBa_K112808
BBa_K112808 Version 1 (Component)
Enterobacteria phage T4 Lysis Device - no promoter

BBa_J36843
BBa_J36843 Version 1 (Component)
Streptavidin, single-chain dimer + His6 tag (no start codon)

BBa_J72102
BBa_J72102 Version 1 (Component)
{araC-Pbad}{rbs.coi}{double terminator}{cin, no start, frameshift}

BBa_K641006
BBa_K641006 Version 1 (Component)
LambdaRep (no start codon)

BBa_B0055
BBa_B0055 Version 1 (Component)
-- No description --

cII p22
BBa_R0053 Version 1 (Component)
Promoter (p22 cII regulated)

BBa_K2066518
BBa_K2066518 Version 1 (Component)
mCherry (with start codon)

BBa_J72095
BBa_J72095 Version 1 (Component)
{araC-Pbad}{rbs.coi}{double terminator}{repL no start}

BBa_K223000
BBa_K223000 Version 1 (Component)
SoxR binds with NO to activate SoxS (NO promoter)

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

cI 434
BBa_C0052 Version 1 (Component)
cI repressor from phage 434 (+LVA)

BBa_J36842
BBa_J36842 Version 1 (Component)
Streptavidin, dead (no start codon)

STAR
BBa_K1893013 Version 1 (Component)
Small transcription activating RNA (STAR)

BBa_M36361
BBa_M36361 Version 1 (Component)
5' Bicistronic UTR (apFAB866, GENE10_BCD2), No ATG Start

RFC105 A
BBa_K1362440 Version 1 (Component)
N-terminal start overhang (T)(A)-GATG=RBS+Start RFC[105] A

hixC
BBa_J44000 Version 1 (Component)
hixC binding site for Salmonella typhimurium Hin recombinase

BBa_K395160
BBa_K395160 Version 1 (Component)
RBS-CmR(no promoter and terminator)

BBa_I716210
BBa_I716210 Version 1 (Component)
BamHI endonuclease without start codon

Prm rna
BBa_I12005 Version 1 (Component)
lambda Prm Inverted Antisense (No start codon)

cinr
BBa_C0077 Version 1 (Component)
cinR activator from Rhizobium leguminosarum (+LVA)

BBa_J36840
BBa_J36840 Version 1 (Component)
Streptavidin, wild-type core (no start codon)