iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
BBa_B0034BBa_B0034 Version 1 (Component)RBS (Elowitz 1999) -- defines RBS efficiency
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0030BBa_B0030 Version 1 (Component)RBS.1 (strong) -- modified from R. Weiss
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
BBa_K1114107BBa_K1114107 Version 1 (Component)Bicistronic Design RBS 2, MoClo Format with BC fusion sites
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
BBa_J61101BBa_J61101 Version 1 (Component)Ribosome Binding Site Family Member
BBa_J61120BBa_J61120 Version 1 (Component)Ribosome Binding Site Family Member
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
BBa_K1114110BBa_K1114110 Version 1 (Component)Bicistronic design RBS 13, MoClo Format with BC fusion sites
BBa_K1114109BBa_K1114109 Version 1 (Component)Bicistronic design RBS 12, MoClo Format with BC fusion sites
BBa_K1114111BBa_K1114111 Version 1 (Component)Bicistronic design RBS 16, MoClo Format with BC fusion sites
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
BBa_K1114108BBa_K1114108 Version 1 (Component)Bicistronic design RBS 8, MoClo Format with BC fusion sites
BBa_K2066018BBa_K2066018 Version 1 (Component)UNS 2 Sequence, from Torella et al., 2013
BBa_K1114106BBa_K1114106 Version 1 (Component)Bicistronic Design RBS 1, MoClo Format with BC fusion sites
BBa_K1114005BBa_K1114005 Version 1 (Component)The MoClo format of BBa_J23104 with AB fusion sites.
RBS_cassetteRBS_cassette Version 1 (Component)AvrII restriction site (cctagg), overlapped with RBS (aggagga)
pT7BBa_K525998 Version 1 (Component)Promoter T7 and RBS
RBS-RFPBBa_K093005 Version 1 (Component)RFP with RBS
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_J61100BBa_J61100 Version 1 (Component)Ribosome Binding Site Family Member
T7 RBSBBa_K1362090 Version 1 (Component)strong T7 RBS
BBa_J85600BBa_J85600 Version 1 (Component)attB1 recombination site
PBS_F24PBS_F24 Version 1 (Component) BBa_K1114006BBa_K1114006 Version 1 (Component)The MoClo format of BBa_J23104 with EB fusion sites.
BBa_K1114100BBa_K1114100 Version 1 (Component)MoClo format of a modified version of BBa_B0030 with BC fusion sites.
BBa_K1114102BBa_K1114102 Version 1 (Component)MoClo format of a modified version of BBa_B0032 with BC fusion sites
BBa_K1114101BBa_K1114101 Version 1 (Component)MoClo format of a modified version of BBa_B0031 with BC fusion sites.
BBa_C0261BBa_C0261 Version 1 (Component)AHL-making Enzyme, luxI (+RBS)
BBa_K1114104BBa_K1114104 Version 1 (Component)MoClo formatted version of B0034 with BC fusion sites
BBa_K1114103BBa_K1114103 Version 1 (Component)MoClo formatted version of B0033 with BC fusion sites
BBa_K1114000BBa_K1114000 Version 1 (Component)The MoClo format of BBa_J23100 with AB fusion sites.
//rbsrbs Version 1 (Collection) mCherryBBa_J06702 Version 1 (Component)mCherry, bacterial with RBS and forward terminator
RBS-spoVGBBa_K143021 Version 1 (Component)SpoVG ribosome binding site (RBS) for B. subtilis
BBa_K1114027BBa_K1114027 Version 1 (Component)The MoClo format of BBa_R0040 with FB fusion sites.
BBa_K208014BBa_K208014 Version 1 (Component)GFP (Silver Fusion)/Double Terminator
BBa_I13457BBa_I13457 Version 1 (Component)Improved insertion site with two RNAse E cut sites
BBa_K1114011BBa_K1114011 Version 1 (Component)The MoClo format of BBa_J23108 with AB fusion sites.
BBa_K1114012BBa_K1114012 Version 1 (Component)The MoClo format of BBa_J23109 with AB fusion sites.