Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
BBa_J56012BBa_J56012 Version 1 (Component)Invertible sequence of dna includes Ptrc promoter
tetA(C)fBBa_J31007 Version 1 (Component)tetracycline resistance protein TetA(C) (forward), [cf. BBa_J31006]
rbs+crtZBBa_I742158 Version 1 (Component)crtZ (beta-carotene hydroxylase) with native rbs
LacZBBa_I732005 Version 1 (Component)lacZ (encoding beta-galactosidase, full-length)
pSC101BBa_I50041 Version 1 (Component)pSC101 origin of replication, reverse
BBa_K1650010BBa_K1650010 Version 1 (Component)Biosynthesis of beta-carotene
tetA(C)bBBa_J31006 Version 1 (Component)tetracycline resistance protein TetA(C) (backwards) [cf. BBa_J31007]
BBa_I742157BBa_I742157 Version 1 (Component)crtZ (beta-carotene hydroxylase) coding sequence
BBa_K572009BBa_K572009 Version 1 (Component)Mouse Beta Carotene Dioxygenase
BBa_K223042BBa_K223042 Version 1 (Component)Blh Gene: Cleaves beta-carotene into retinal
BBa_K1604020BBa_K1604020 Version 1 (Component)araC-pBAD + beta-carotene
ninabGenBBa_K343005 Version 1 (Component)Beta-carotene 15
BBa_K395700BBa_K395700 Version 1 (Component)crtW (beta-carotene ketolase) coding sequence
BBa_K395705BBa_K395705 Version 1 (Component)crtW (beta-carotene ketolase) with rbs
BBa_K1906005BBa_K1906005 Version 1 (Component)Beta-subunit of Qbeta replicase holoenzyme
tetABBa_P1005 Version 1 (Component)tetracycline resistance cassette
BBa_K572010BBa_K572010 Version 1 (Component)Mouse Beta Carotene Dioxygenase Generator
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
BBa_K382011BBa_K382011 Version 1 (Component)amiRNA Construct for carotene beta-ring hydroxylase (BETA-OHASE 1)
BBa_K371049BBa_K371049 Version 1 (Component)MPF(meta-prefix)
BBa_M333333BBa_M333333 Version 1 (Component)Produces Beta-carotene from the biochemical input GGPP
BBa_M31103BBa_M31103 Version 1 (Component)Produces Beta-carotene from the biochemical input GGPP
BBa_M31126BBa_M31126 Version 1 (Component)Produces Beta-carotene from the biochemical input GGPP
BBa_M31107BBa_M31107 Version 1 (Component)Produces Beta-carotene from the biochemical input GGPP
BBa_M31109BBa_M31109 Version 1 (Component)Produces Beta-carotene from the biochemical input GGPP
BBa_M31127BBa_M31127 Version 1 (Component)Produces Beta-carotene from the biochemical input GGPP
BBa_M31105BBa_M31105 Version 1 (Component)Produces Beta-carotene from the biochemical input GGPP
BBa_M31108BBa_M31108 Version 1 (Component)Produces Beta-carotene from the biochemical input GGPP
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
RFP2BBa_I715023 Version 1 (Component)Carboxyl portion of RFP
BBa_K1604022BBa_K1604022 Version 1 (Component)araC-pBAD + β-carotene + J23100 + blh
BBa_K223035BBa_K223035 Version 1 (Component)BLH gene- cleaves beta-carotene into retinoic acid