Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
cI lamBBa_C0051 Version 1 (Component)cI repressor from E. coli phage lambda (+LVA)
pBad/araCBBa_I0500 Version 1 (Component)Inducible pBad/araC promoter
cI lamBBa_R0051 Version 1 (Component)promoter (lambda cI regulated)
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
BBa_K2142005BBa_K2142005 Version 1 (Component)Composite part containing inducible mazF toxin and dam metylase
cI lamBBa_R1051 Version 1 (Component)Promoter, Standard (lambda cI regulated)<br>
AraBBa_K808000 Version 1 (Component)araC-Pbad - Arabinose inducible regulatory promoter/repressor unit
BBa_K200001BBa_K200001 Version 1 (Component)Dam methylase -> Dam
DAMBBa_K223037 Version 1 (Component)DAM Methylase
BBa_K209402BBa_K209402 Version 1 (Component)AarI A-B part, signal sequence-FLAG-YFP [SSFYFP]
BBa_K2142000BBa_K2142000 Version 1 (Component)Composite part containing mazE and red chromoprotein
BBa_K914003BBa_K914003 Version 1 (Component)L-rhamnose-inducible promoter (pRha)
BBa_K1937009BBa_K1937009 Version 1 (Component)Epsilon/MazF : toxin and antitoxin
toxin ParEBBa_K2150104 Version 1 (Component)6249 toxin CDS
BBa_K823044BBa_K823044 Version 1 (Component)MazF a bacterial toxin
BBa_K302034BBa_K302034 Version 1 (Component)mazEF toxin-antitoxin cluster
BBa_K2142007BBa_K2142007 Version 1 (Component)Composite part containing ccdA and blue chromoprotein
BBa_K416004BBa_K416004 Version 1 (Component)Aga2:(Gly3Ser)4 Linker Composite Part
BBa_K1973033BBa_K1973033 Version 1 (Component)nahR-Psal (inducible promoter)
BBa_J120026BBa_J120026 Version 1 (Component)Composite part containing Yeast promoter along with ADAM17.
BBa_K875008BBa_K875008 Version 1 (Component)IPTG inducible Tse2 toxin
BBa_K209400BBa_K209400 Version 1 (Component)AarI B-C part, hM4D
BBa_K1613006BBa_K1613006 Version 1 (Component)A composite part that can detect some toxins.
BBa_K1613007BBa_K1613007 Version 1 (Component)A composite part that can detect some toxins.
BBa_K1613005BBa_K1613005 Version 1 (Component)A composite part that can detect some toxins.
BBa_K1075041BBa_K1075041 Version 1 (Component)RBS32-MazE-(Ec)ssrA(DAS+4)
BBa_K1075048BBa_K1075048 Version 1 (Component)AraC-pBAD-RBS32-mazF-TT-pLac-RBS32-mazE-(Ec)ssrA(DAS+4)-TT
Tse2/Tsi2BBa_K314202 Version 1 (Component)Toxin+ Antitoxin-Tse2 + Tsi2
BBa_J52015BBa_J52015 Version 1 (Component)composite part
BBa_K1937010BBa_K1937010 Version 1 (Component)Epsilon/MazF toxin and antitoxin in pSBBS0K-mini
BBa_I766002BBa_I766002 Version 1 (Component)YopJ, Irrev. MAPKK Ser/Thr Acetylase
BBa_K209010BBa_K209010 Version 1 (Component)Aar1 C-D part, RasC da (no CAAX) (Dictyostelium discoideum)
BBa_K209011BBa_K209011 Version 1 (Component)Aar1 C-D part, RasG da (no CAAX) (Dictyostelium discoideum)
BBa_K872004BBa_K872004 Version 1 (Component)Co2 biosensor composite part