Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
BBa_J56012BBa_J56012 Version 1 (Component)Invertible sequence of dna includes Ptrc promoter
pSC101BBa_I50041 Version 1 (Component)pSC101 origin of replication, reverse
BBa_K1412002BBa_K1412002 Version 1 (Component)Control group of K1412001
BBa_K1104701BBa_K1104701 Version 1 (Component)The control group of positive feedback in suicide group
BBa_I746320BBa_I746320 Version 1 (Component)GFP under control of PF promoter
BBa_I746324BBa_I746324 Version 1 (Component)GFP under control of Psid promoter
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
BBa_K1758323BBa_K1758323 Version 1 (Component)UTR-sfGFP under control of Copper responsive promoter
BBa_K142001BBa_K142001 Version 1 (Component)lacI IS mutant (IPTG unresponsive) R197F
BBa_K1418001BBa_K1418001 Version 1 (Component)Chlorophyllase (TaCHL from <i>Triticum aestivum</i>) with stop codons removed
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
RFP2BBa_I715023 Version 1 (Component)Carboxyl portion of RFP
BBa_K1758321BBa_K1758321 Version 1 (Component)mRFP under control of copper responsive promoter
BBa_K1021001BBa_K1021001 Version 1 (Component)nptII (neomycin phosphotransferase)
BBa_K1415001BBa_K1415001 Version 1 (Component)PBAN (Bombyx mori)
BBa_I714031BBa_I714031 Version 1 (Component)OriT-R (Origin of Transfer for the R751-plasmid nic region)
BBa_I746325BBa_I746325 Version 1 (Component)GFP under control of PLL promoter
RFP1BBa_I715022 Version 1 (Component)Amino Portion of RFP
BBa_I746322BBa_I746322 Version 1 (Component)GFP under control of PP promoter
BLpBBa_K238013 Version 1 (Component)Exact promoter of the blue light receptor
BBa_K1758330BBa_K1758330 Version 1 (Component)Lead repressor under control of constitutive promoter and strong RBS
BBa_K1412004BBa_K1412004 Version 1 (Component)reverse sequence of RBS0034+luxR-TT0015
COMPyBBa_K1492001 Version 1 (Component)Clickable Outer Membrane Protein y
BBa_K1758105BBa_K1758105 Version 1 (Component)mRFP generator under control of T7 promoter
BBa_K1321002BBa_K1321002 Version 1 (Component)Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25
BBa_I746321BBa_I746321 Version 1 (Component)GFP under control of PO promoter
BBa_K1758311BBa_K1758311 Version 1 (Component)mRFP under control of the chromium responsive promoter
BBa_K1012001BBa_K1012001 Version 1 (Component)Protein Phosphatase 1 with HA tag
GFP1BBa_I715019 Version 1 (Component)Amino Half of GFP (aka GFP1)
BBa_K1412007BBa_K1412007 Version 1 (Component)<i>CheZ</i>-TT