SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_J56012
BBa_J56012 Version 1 (Component)
Invertible sequence of dna includes Ptrc promoter

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

MtrC
BBa_K1748003 Version 1 (Component)
Extracelllular metal reducing respiratory system periplasmic decaheme cytochrome C component MtrC

MtrA
BBa_K1748000 Version 1 (Component)
Extracelllular metal reducing respiratory system periplasmic decaheme cytochrome C component MtrA

OmcA
BBa_K1748002 Version 1 (Component)
Extracelllular metal reducing respiratory system periplasmic decaheme Cytochrome C component OmcA

tetA(C)f
BBa_J31007 Version 1 (Component)
tetracycline resistance protein TetA(C) (forward), [cf. BBa_J31006]

MtrB
BBa_K1748001 Version 1 (Component)
Extracelllular metal reducing respiratory system integral outer-membrane β-barrel protein MtrB

tetA(C)b
BBa_J31006 Version 1 (Component)
tetracycline resistance protein TetA(C) (backwards) [cf. BBa_J31007]

BBa_K917008
BBa_K917008 Version 1 (Component)
S. oneidensis decaheme cytochrome c mtrA

BBa_I13458
BBa_I13458 Version 1 (Component)
promoter C and arabinose C operon

PelB
BBa_J32015 Version 1 (Component)
PelB leader sequence; directs protein to E. coli periplasmic membrane

BBa_K917007
BBa_K917007 Version 1 (Component)
S. oneidensis decaheme cytochrome c electron export system mtrCAB

BBa_K1420003
BBa_K1420003 Version 1 (Component)
MerP, mercuric transport protein periplasmic component

BBa_K371049
BBa_K371049 Version 1 (Component)
MPF(meta-prefix)

glnG
BBa_J64977 Version 1 (Component)
glnG (ntrC)

BBa_K1601007
BBa_K1601007 Version 1 (Component)
Cytochrome C P.Denitrificans

BBa_K1601000
BBa_K1601000 Version 1 (Component)
Cytochrome C S.oneidensis without stop codon

BBa_K371050
BBa_K371050 Version 1 (Component)
MSF(meta-suffix)

BBa_K917014
BBa_K917014 Version 1 (Component)
pLac promoter plus S. oneidensis tetraheme cytochrome c cymA

BBa_K209400
BBa_K209400 Version 1 (Component)
AarI B-C part, hM4D

BBa_K1196015
BBa_K1196015 Version 1 (Component)
cytochrome c reductase

VanBP
BBa_J58105 Version 1 (Component)
Synthetic periplasmic binding protein that docks a vanillin molecule

BBa_K917009
BBa_K917009 Version 1 (Component)
S. oneidensis tetraheme cytochrome c cymA

BBa_K1601001
BBa_K1601001 Version 1 (Component)
Cytochrome C Synechocystis sp without stop codon

RFC105 Z
BBa_K1362421 Version 1 (Component)
C-terminal stop overhang TAAT=STOP+1/3Stop RFC[105] overhang Z

BBa_K523001
BBa_K523001 Version 1 (Component)
RBS + malS (E. coli periplasmic α-amylase)

TonB
BBa_I765003 Version 1 (Component)
TonB ferric siderophore transport system, periplasmic binding protein TonB [ Pseudomonas entomophila

BBa_K1196023
BBa_K1196023 Version 1 (Component)
cytochrome c reductase device

NpuDnaE(C)
BBa_K1362401 Version 1 (Component)
NpuDnaE C-Intein cloning piece

BBa_K1151001
BBa_K1151001 Version 1 (Component)
Histidine-rich metal-binding protein

BBa_K1465101
BBa_K1465101 Version 1 (Component)
Cytochrome c from Geobacter sulfurreducens

BBa_K117000
BBa_K117000 Version 1 (Component)
Lysis gene (promotes lysis in colicin-producing bacteria strain)

BBa_K309020
BBa_K309020 Version 1 (Component)
eCFP (for use in C. elegans chassis)

BBa_K1459003
BBa_K1459003 Version 1 (Component)
PmrA-PmrB(LBT) two-component system

BBa_K249006
BBa_K249006 Version 1 (Component)
Fusion EYFP with C-terminal Arginine Tag

BBa_K209415
BBa_K209415 Version 1 (Component)
AarI B-C part, hM2D

BBa_K215107
BBa_K215107 Version 1 (Component)
Extracellular Secretion System

BBa_K523002
BBa_K523002 Version 1 (Component)
RBS + bglX (E. coli perisplasmic β-glucosidase)

BBa_K1950000
BBa_K1950000 Version 1 (Component)
trc promoter + RBS

BBa_K115017
BBa_K115017 Version 1 (Component)
RNA thermometer (ROSE 32??C)

BBa_K309012
BBa_K309012 Version 1 (Component)
Unc-54 3' UTR (for use in C. elegans chassis)

BBa_K346004
BBa_K346004 Version 1 (Component)
RBS(B0034)_MBP(lead metal binding peptide egineered from PbrR)+Terminator(B0015)

CymA
BBa_K1748004 Version 1 (Component)
Inner-membrane tetraheme c-type cytochrome CymA