SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
pBad/araCBBa_I0500 Version 1 (Component)Inducible pBad/araC promoter
BBa_I13453BBa_I13453 Version 1 (Component)Pbad promoter
BBa_J61101BBa_J61101 Version 1 (Component)Ribosome Binding Site Family Member
pBADBBa_K206000 Version 1 (Component)pBAD strong
LasR+PAIBBa_R0079 Version 1 (Component)Promoter (LasR & PAI regulated)
BBa_J61120BBa_J61120 Version 1 (Component)Ribosome Binding Site Family Member
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_J61100BBa_J61100 Version 1 (Component)Ribosome Binding Site Family Member
BBa_I766102BBa_I766102 Version 1 (Component)EE Leucine Zipper
PA1_04sPA1_04s Version 1 (Component) PBS_F24PBS_F24 Version 1 (Component) BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
BBa_K270002BBa_K270002 Version 1 (Component)Leucine Landing Pad
BBa_I766103BBa_I766103 Version 1 (Component)RR Leucine Zipper
BBa_I720007BBa_I720007 Version 1 (Component)araBp->rpoN (leucine landing pad)
AraBBa_K808000 Version 1 (Component)araC-Pbad - Arabinose inducible regulatory promoter/repressor unit
BAT2BBa_J45008 Version 1 (Component)branched-chain amino acid transaminase (BAT2); converts leucine to alpha-ketoisocaproate
BBa_K138000BBa_K138000 Version 1 (Component)NifHp in BioBrick Compatible Leucine Landing Pad
BBa_K138001BBa_K138001 Version 1 (Component)nifHp driving mutant NifL in Leucine Landing Pad
BBa_K228009BBa_K228009 Version 1 (Component)AraC protein(reversed sequence) and Pbad promoter
BBa_K539711BBa_K539711 Version 1 (Component)ilvC (ketol-acid reductoisomerase NAD(P)-binding)
BBa_K1321002BBa_K1321002 Version 1 (Component)Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25
RBS-spoVGBBa_K143021 Version 1 (Component)SpoVG ribosome binding site (RBS) for B. subtilis
BBa_K179001BBa_K179001 Version 1 (Component)leucine dehydrogenase
BBa_K1638012BBa_K1638012 Version 1 (Component)Leucine Zipper
BBa_J44002BBa_J44002 Version 1 (Component)pBAD reverse
BBa_K1321003BBa_K1321003 Version 1 (Component)Re-entry of BBa_K863101, Cellulose Binding Domain CBDcex in rfc25
BBa_K1719000BBa_K1719000 Version 1 (Component)A gene encoding leucine dehydrogenase
BBa_K1486042BBa_K1486042 Version 1 (Component)Leucine Zipper
BBa_K138002BBa_K138002 Version 1 (Component)Arabinose Landing Pad
PgadBBa_K559011 Version 1 (Component)Pgad - Intracellular Chloride-Sensing Cassette
padBO_32952 Version 1 (Component) BBa_K814008BBa_K814008 Version 1 (Component)ScyB (leucine dehydrogenase) generator
BBa_K1321009BBa_K1321009 Version 1 (Component)Nickel Binding Protein (NiBP) Freiburg format (RFC[25])
lasIBBa_C0178 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa (no LVA)
BBa_J61127BBa_J61127 Version 1 (Component)Ribosome Binding Site Family Member
BBa_K1585999BBa_K1585999 Version 1 (Component)lacI binding site
BBa_K1719002BBa_K1719002 Version 1 (Component)leucine dehydrogenase + Terminator
BBa_J42022BBa_J42022 Version 1 (Component)PolyLinker for Nested Landing Pad
ZipR34BBa_J18924 Version 1 (Component)R34 heterodimerizing leucine zipper
BBa_S05273BBa_S05273 Version 1 (Component)Leucine Zipper with flexible linker