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Public
ACS Synbio Generation
ACS_Synbio_Generation Version 1 (Activity)
Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
Public
iGEM to SBOL conversion
igem2sbol Version 1 (Activity)
Conversion of the iGEM parts registry to SBOL2.1
Public
BBa_B0032
BBa_B0032 Version 1 (Component)
RBS.3 (medium) -- derivative of BBa_0030
Public
BBa_J61101
BBa_J61101 Version 1 (Component)
Ribosome Binding Site Family Member
Public
SyBiOntKB to SBOL conversion
SyBiOntKB2sbol Version 1 (Activity)
Conversion of the Synthetic Biology Ontology knowledge base to SBOL 2.1
Public
SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Public
BBa_B0031
BBa_B0031 Version 1 (Component)
RBS.2 (weak) -- derivative of BBa_0030
Public
BBa_J61120
BBa_J61120 Version 1 (Component)
Ribosome Binding Site Family Member
Public
Direct Sequence Pull
direct Version 1 (Activity)
Used to indicate that a sequence was pulled directly from a source with no alterations made
Public
BBa_B0033
BBa_B0033 Version 1 (Component)
RBS.4 (weaker) -- derivative of BBa_0030
Public
BBa_J15001
BBa_J15001 Version 1 (Component)
strong synthetic E. coli ribosome binding site with SacI site.
Public
hixC
BBa_J44000 Version 1 (Component)
hixC binding site for Salmonella typhimurium Hin recombinase
Public
SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Public
BBa_J61100
BBa_J61100 Version 1 (Component)
Ribosome Binding Site Family Member
Public
BBa_J85600
BBa_J85600 Version 1 (Component)
attB1 recombination site
Public
attP
BBa_K1463040 Version 1 (Component)
PhiC31 attP site
Public
attB
BBa_K1463041 Version 1 (Component)
Reversed PhiC31 attB site
Public
BBa_K1039000
BBa_K1039000 Version 1 (Component)
attP site for phiC31 integrase
Public
BBa_K2116023
BBa_K2116023 Version 1 (Component)
Anderson promoter J23118 flanked by phiC31 attP and attB sites
Public
RBS_cassette
RBS_cassette Version 1 (Component)
AvrII restriction site (cctagg), overlapped with RBS (aggagga)
Public
P22 attP
BBa_I11033 Version 1 (Component)
P22 ''attP''
Public
lox
BBa_J61046 Version 1 (Component)
[Lox] site for recombination
Public
Sequence Cut Out of Plasmid
cut_out_of_plasmid Version 1 (Activity)
Used to indicate that a sequence was cut out of the plasmid referenced as the source
Public
BBa_K1433001
BBa_K1433001 Version 1 (Component)
attB-J23110-attP
Public
BBa_I13457
BBa_I13457 Version 1 (Component)
Improved insertion site with two RNAse E cut sites
Public
BBa_K2100049
BBa_K2100049 Version 1 (Component)
pENTR attB-flipped eYFP-attP (TP901)
Public
BBa_K241003
BBa_K241003 Version 1 (Component)
phiC31 attB GA
Public
BBa_K241002
BBa_K241002 Version 1 (Component)
phiC31 attB GG
Public
BBa_K241001
BBa_K241001 Version 1 (Component)
phiC31 attB TT
Public
BBa_K241004
BBa_K241004 Version 1 (Component)
phiC31 attB TG
Public
RBS-spoVG
BBa_K143021 Version 1 (Component)
SpoVG ribosome binding site (RBS) for B. subtilis
Public
BBa_I13452
BBa_I13452 Version 1 (Component)
Adds another BioBrick site
Public
phaC1-A-B1
BBa_K934001 Version 1 (Component)
phaC1-A-B1 [P(3HB) synthesis]
Public
BBa_K1039036
BBa_K1039036 Version 1 (Component)
PhiC31 att R
Public
BBa_K1039035
BBa_K1039035 Version 1 (Component)
PhiC31 att B
Public
BBa_K1039037
BBa_K1039037 Version 1 (Component)
PhiC31 att L
Public
BBa_K165002
BBa_K165002 Version 1 (Component)
Kozak sequence (yeast RBS)
Public
PBS_F24
PBS_F24 Version 1 (Component)

Public
BBa_K2116022
BBa_K2116022 Version 1 (Component)
Anderson Promoter J23118 flanked by tp901 attP and attB sites
Public
T7 RBS
BBa_K1362090 Version 1 (Component)
strong T7 RBS
Public
BBa_K2116021
BBa_K2116021 Version 1 (Component)
Anderson promoter J23118 flanked by bxb1 attP and attB sites
Public
EcoRI
EcoRI Version 1 (Component)

Public
NheI
NheI Version 1 (Component)

Public
BBa_K617004
BBa_K617004 Version 1 (Component)
Lambda attP P'OP
Public
PacI
PacI Version 1 (Component)

Public
SpeI
SpeI Version 1 (Component)

Public
phi80 attP
BBa_K300991 Version 1 (Component)
phi80 phage attP integration site
Public
BBa_K1433002
BBa_K1433002 Version 1 (Component)
attL-J23110-attR
Public
RBS_SpaR
RBS_SpaR Version (Component)

Public
RBS_SpaK
RBS_SpaK Version (Component)

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