GFPGFP Version 1 (Unknown)Organism: Cryptococcus neoformans serotype A H99S
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
GFPBBa_E0040 Version 1 (Component)green fluorescent protein derived from jellyfish Aequeora victoria wild-type GFP (SwissProt: P42212
BBa_J04450BBa_J04450 Version 1 (Component)RFP Coding Device
YFPBBa_E0032 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
pSB1C3pSB1C3 Version 1 (Component)High copy BioBrick assembly plasmid
GFP reportBBa_E0240 Version 1 (Component)GFP generator
LasR+PAIBBa_R0079 Version 1 (Component)Promoter (LasR & PAI regulated)
eyfpBBa_E0030 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
GFP generaBBa_E0840 Version 1 (Component)GFP generator
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
Scar 25BBa_B0105 Version 1 (Component)RFC 25 Scar Sequence
ecfpBBa_E0020 Version 1 (Component)engineered cyan fluorescent protein derived from A. victoria GFP
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
BBa_K1051000BBa_K1051000 Version 1 (Component)Stop codon free RFP in RFC[23] standard
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
RBS-RFPBBa_K093005 Version 1 (Component)RFP with RBS
BBa_I13507BBa_I13507 Version 1 (Component)Screening plasmid intermediate
RFC 37BBa_K245009 Version 1 (Component)RFC 37 Scar Sequence
PA1_04sPA1_04s Version 1 (Component) Scar25 ATGBBa_K1319106 Version 1 (Component)RFC 25 Translation Start Scar Sequence
ECFPBBa_E0022 Version 1 (Component)enhanced cyan fluorescent protein derived from A. victoria GFP
BBa_K187019BBa_K187019 Version 1 (Component)RFP in pAB, Biobytes plasmid
BBa_K081014BBa_K081014 Version 1 (Component)RFP protein generator - PoPS->RFP
BBa_K187018BBa_K187018 Version 1 (Component)GFP in pAB, BioBytes plasmid
BBa_K187025BBa_K187025 Version 1 (Component)terminator in pAB, BioBytes plasmid
BBa_I13504BBa_I13504 Version 1 (Component)Screening plasmid intermediate
BFPBBa_K592100 Version 1 (Component)Blue Fluorescent Protein (mTagBFP)
mRFPrBBa_J31008 Version 1 (Component)RFP reverse
BBa_K187015BBa_K187015 Version 1 (Component)Chloramphenicol resistance in pAB, Biobytes plasmid
BBa_K187017BBa_K187017 Version 1 (Component)Ampicillin resistance in pAB, Biobytes plasmid
RFP2BBa_I715023 Version 1 (Component)Carboxyl portion of RFP
BBa_K137006BBa_K137006 Version 1 (Component)pabB (from pABA synthesis)
BBa_K187016BBa_K187016 Version 1 (Component)Kanamycin resistance gene in pAB, BioBytes plasmid
GFPBBa_K145015 Version 1 (Component)GFP with LVA tag
BBa_K1321337BBa_K1321337 Version 1 (Component)sfGFP in Freiburg format (RFC 25)
BBa_K187008BBa_K187008 Version 1 (Component)Sigma 70 100% promoter in pAB, BioBytes plasmid
BBa_K187005BBa_K187005 Version 1 (Component)Sigma 70 25% promoter in pAB, BioBytes plasmid
BBa_K187007BBa_K187007 Version 1 (Component)Sigma 70 75% promoter in pAB, Biobytes plasmid